DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and Ppm1b

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_001257548.1 Gene:Ppm1b / 24667 RGDID:3374 Length:465 Species:Rattus norvegicus


Alignment Length:379 Identity:202/379 - (53%)
Similarity:262/379 - (69%) Gaps:15/379 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGC 65
            ||.|||||||.|||..|.||.|.:|:|||||||.|||||:.|..|:...|.|||||||:|||||.
  Rat     1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGS 65

  Fly    66 KVSEHCAKHLLESIISTEEFIGGD-----------HVK-GIRTGFLRIDEVMRELPEFTRESEKC 118
            :|:.:|:.||||.|.:.|:|...|           :|| |||||||:|||.||...:.....:: 
  Rat    66 RVANYCSTHLLEHITTNEDFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMRNFSDLRNGMDR- 129

  Fly   119 GGTTAVCAFVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNG 183
            .|:|||...:..|.:|..|||||||||||.|...|:||||||..|.|||||.||||||||:||||
  Rat   130 SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVMIQRVNG 194

  Fly   184 TLAVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIH 248
            :|||||||||||:|.|..||..|||||||||::...|.:.|||:||||||||||||||::|.|::
  Rat   195 SLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVN 259

  Fly   249 SRMRVTSNLVSIANQVVDTCLHKGSRDNMSIIIIAFPGAPKPTEEAIEAEHRLEKQIEKITRDEI 313
            ||:.|:.:|.::.|.||||||||||||||||:::.|..|||.::||::.:..|:|.:|....:.:
  Rat   260 SRLEVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFANAPKVSDEAVKRDLELDKHLESRVEEIM 324

  Fly   314 ESSKITDYVDLLKCLQ--NRDDIEGLPPGGGLQSKYHVIERTFKQEFPDRPCEG 365
            :.|......||...::  :.::|..|||||||..|.:|||..:.:..|::..:|
  Rat   325 QKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGKRNVIEAVYSRLNPNKDNDG 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 160/271 (59%)
PP2C_C 278..352 CDD:285117 25/75 (33%)
Ppm1bNP_001257548.1 PP2Cc 23..295 CDD:238083 160/272 (59%)
PP2C_C 289..365 CDD:285117 25/75 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 314 1.000 Domainoid score I1251
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2027
Inparanoid 1 1.050 396 1.000 Inparanoid score I1894
OMA 1 1.010 - - QHG53745
OrthoDB 1 1.010 - - D262211at33208
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 1 1.000 - - mtm9125
orthoMCL 1 0.900 - - OOG6_100270
Panther 1 1.100 - - O PTHR47992
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X444
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.880

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