DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alph and ppm-1.D

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_497539.3 Gene:ppm-1.D / 190269 WormBaseID:WBGene00021856 Length:766 Species:Caenorhabditis elegans


Alignment Length:377 Identity:105/377 - (27%)
Similarity:149/377 - (39%) Gaps:90/377 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GNKLLFGVSSMQGWRSEMEDAYYARA-GLGDALPDWSFFAVFDGHAGCKVSEHCAKHLLESIIST 82
            |..:...|::.||.|..|||...... .:.:.|.||:|..|||||.|...||:..:|||.:|...
 Worm    16 GENMRITVAASQGGRRYMEDRCVIHTERINNGLLDWTFVGVFDGHGGEHASEYVRRHLLMNITKN 80

  Fly    83 EEFIGG---DHVKGIRTGFLRIDEVMR----ELPEFTRESEKCGGTTAVCAFVGLTQVYIANCGD 140
            ::|...   |.::.||.|||...|.||    |.|..........|||..|.|:...::|..:.||
 Worm    81 QKFESNSDEDILEAIRQGFLMTHEQMRHVYDEWPYTASGYPSTAGTTVSCVFIRNGKLYTGHVGD 145

  Fly   141 SRAVL--CRQGV----PVFATQDHKPILPEEKERIYNAGGSVMIK----RV-------------- 181
            |...|  ...|.    |:  |.||||....|:.||..|||...:|    ||              
 Worm   146 SAIFLGTVENGELHSRPL--TTDHKPESVHEQLRIAKAGGETAVKSGVTRVVWKRPQKMSQFMMM 208

  Fly   182 --NGT----------------LAVSRALGDYDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLV 228
              |..                |:|:|:|||....|.|..   ..:|||||::.......:|..||
 Worm   209 TSNSNEQKHHQNPQIMENIPFLSVARSLGDLWSYNEKTN---MFIVSPEPDLGVHRLTGNDFCLV 270

  Fly   229 LACDGIWDVMSNEDVCSFIHSRMRVTSNLVSIANQ--------VVDTCLHKG---SRDNMSIIII 282
            ||.||:.:||:.:...|.:...    ..:|.|..:        |:.:.|.|.   ..||::|..:
 Worm   271 LASDGMTNVMTGDQAISIVFKE----EEMVEIHEEINRNHSRCVLRSALQKWRSLRADNVTIATV 331

  Fly   283 AFPGAPKPTEEAIEAEHRLEKQIEKITRDEIES-SKITDYVDLLKCLQNRDD 333
            .|                   .||.|...:.|. .|:..||:..:.|.:|.|
 Worm   332 IF-------------------DIEPIKYTDAEMLMKVGKYVNASQVLTDRPD 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 93/320 (29%)
PP2C_C 278..352 CDD:285117 12/57 (21%)
ppm-1.DNP_497539.3 PP2Cc 19..333 CDD:238083 93/322 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.