DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and ppm-1.G

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:NP_741086.1 Gene:ppm-1.G / 175233 WormBaseID:WBGene00018362 Length:491 Species:Caenorhabditis elegans


Alignment Length:489 Identity:116/489 - (23%)
Similarity:166/489 - (33%) Gaps:208/489 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGGFLDKPKTAKHNDEGEGNKLLFGVSSMQGWRSEMEDAYYARAGLGDALPDWSFFAVFDGHAGC 65
            ||.:|:||...|..:||.||.|.:..::|||||...|||:..   :.|...||..|.|:|||.|.
 Worm     1 MGAYLNKPIIEKEKEEGSGNGLSYACTTMQGWRVNQEDAHNC---VVDLHTDWHMFGVYDGHGGT 62

  Fly    66 KVS-------------------EHCAKHLLESIISTEEFIG-----------GDHVKGIRTG--- 97
            :||                   :..|:.|.::.:..::||.           ||..|..:.|   
 Worm    63 EVSKFTSAKLPDFLKERKFWEADDVAECLQKAFVDFDDFIRAEESMKELKDIGDEGKPKKAGGEA 127

  Fly    98 -----FLRID------------------------------------------------------- 102
                 ..|||                                                       
 Worm   128 DSEDEADRIDTIEEASVPLAELLKRYGGAGVGKSLLSAFLAKGDVSDDSEDEDEDEEEAEEQDDT 192

  Fly   103 -----------EVMRELPEFTRESE---------KC----------------------------- 118
                       ||:.|..|...|.|         :|                             
 Worm   193 EEKKENEDASAEVVIENAEDKEEEEGSPKKKGQKRCQKSPIQSEAKKSKSETDAETAPSSSSGVD 257

  Fly   119 ---------------------------------------------------------GGTTAVCA 126
                                                                     .||||...
 Worm   258 GVATEEEDEDDSDKEFVADEEEDDEDAEDEQSDEEMVDGSLAPLLLGSGGAEVPGEDSGTTACVC 322

  Fly   127 FVGLTQVYIANCGDSRAVLCRQGVPVFATQDHKPILPEEKERIYNAGGSVMIKRVNGTLAVSRAL 191
            .||..:|.:||.|||||||||.|..|..:.||||....|..||:.|||.:...||||.|.:|||.
 Worm   323 LVGKDKVIVANAGDSRAVLCRNGKAVDLSVDHKPEDEVETNRIHAAGGQIEDGRVNGGLNLSRAF 387

  Fly   192 GDYDFKNVKEKGQCEQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSN 256
            ||:.:|..:|.|..||:::..|::..::....|||:|:||||||:.|.::.|..|:...:...|:
 Worm   388 GDHAYKKNQELGLKEQMITALPDVKIEALTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSS 452

  Fly   257 LVSIANQVVDTCLHKGSR------DNMSIIIIAF 284
            ...:.:.:.|.||...:.      |||::|...|
 Worm   453 CAEVCDALCDACLADSTDGDGTGCDNMTVICTTF 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 104/464 (22%)
PP2C_C 278..352 CDD:285117 2/7 (29%)
ppm-1.GNP_741086.1 PP2Cc 15..483 CDD:214625 108/470 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D957254at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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