DRSC/TRiP Functional Genomics Resources

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Protein Alignment alph and ppm1e

DIOPT Version :9

Sequence 1:NP_651701.1 Gene:alph / 43481 FlyBaseID:FBgn0086361 Length:374 Species:Drosophila melanogaster
Sequence 2:XP_002934392.2 Gene:ppm1e / 100496571 XenbaseID:XB-GENE-877220 Length:653 Species:Xenopus tropicalis


Alignment Length:273 Identity:76/273 - (27%)
Similarity:138/273 - (50%) Gaps:36/273 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 VSSMQGWRSEMEDAYYARAGLGDALPDW------------SFFAVFDGHAGCKVSEHCAKHLLES 78
            :.:::..|.:|||.:.       .:||:            ::|||||||.|...:.:.:.||..:
 Frog   140 IHAIKNMRRKMEDKHV-------CIPDFNILFNLEDQEEQAYFAVFDGHGGVDAAIYASIHLHVN 197

  Fly    79 IISTEEFIGGDHVKGIRTGFLRIDEVMRELPEFTRESEKCGGTTAVCAFVGLTQVYIANCGDSRA 143
            :: .:|....|..:.:...|...||..  :.:..||:.:| |||.|..|:....::||..|||:.
 Frog   198 LV-RQEIFPQDPAEALCRAFRITDESF--VQKAARENLRC-GTTGVVTFIRGNMLHIAWLGDSQV 258

  Fly   144 VLCRQGVPVFATQDHKPILPEEKERIYNAGGSVM---IKRVNGTLAVSRALGDYDFKNVKEKGQC 205
            :|.|:|..|...:.|||...:||.||...||.|:   ..||||:|:||||:||.:.|        
 Frog   259 MLVRRGQAVELMKPHKPDREDEKHRIEALGGCVVWFGAWRVNGSLSVSRAIGDAEHK-------- 315

  Fly   206 EQLVSPEPEIFCQSRQDSDEFLVLACDGIWDVMSNEDVCSFIHSRMRVTSNLVS-IANQVVDTCL 269
             ..:..:.:........|:::|:|||||.:|.::.::....:...::..:...| :|:::|.:..
 Frog   316 -PYICGDADSVSTVLDGSEDYLILACDGFYDTVNPDEAVKVVSDHLKENNGDSSMVAHKLVASAR 379

  Fly   270 HKGSRDNMSIIII 282
            ..||.||:::|::
 Frog   380 DAGSSDNITVIVV 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphNP_651701.1 PP2Cc 24..284 CDD:238083 76/273 (28%)
PP2C_C 278..352 CDD:285117 1/5 (20%)
ppm1eXP_002934392.2 PP2Cc 136..394 CDD:238083 76/273 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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