DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-20L and nuoB

DIOPT Version :10

Sequence 1:NP_651698.1 Gene:ND-20L / 43477 FlyBaseID:FBgn0039669 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_416790.1 Gene:nuoB / 946738 ECOCYCID:EG12083 Length:220 Species:Escherichia coli


Alignment Length:146 Identity:78/146 - (53%)
Similarity:106/146 - (72%) Gaps:2/146 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RLDDLLNWGRKGSLWPLTFGLACCAVEMMHIAAPRYDMDRYGV-VFRASPRQADVLIVAGTLTNK 128
            :|:|::|||||.|:||..|||:||.|||:......:|:.|:|. |.||||||||:::||||...|
E. coli    41 KLNDMVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTCFTK 105

  Fly   129 MAPAFRKIYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGI 193
            |||..:::||||.||:||||||:|||.||.|.. ||||:|.|:.:|||:|:|||||..||.|..:
E. coli   106 MAPVIQRLYDQMLEPKWVISMGACANSGGMYDI-YSVVQGVDKFIPVDVYIPGCPPRPEAYMQAL 169

  Fly   194 LQLQKKVKRMRTLQMW 209
            :.||:.:.:.|....|
E. coli   170 MLLQESIGKERRPLSW 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-20LNP_651698.1 PRK06411 64..204 CDD:235797 76/139 (55%)
nuoBNP_416790.1 PRK06411 18..220 CDD:235797 78/146 (53%)

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