DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-20L and AT5G11770

DIOPT Version :10

Sequence 1:NP_651698.1 Gene:ND-20L / 43477 FlyBaseID:FBgn0039669 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_196738.1 Gene:AT5G11770 / 831049 AraportID:AT5G11770 Length:218 Species:Arabidopsis thaliana


Alignment Length:171 Identity:121/171 - (70%)
Similarity:141/171 - (82%) Gaps:7/171 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 NPPKWGYSAFGRNQKTWGEWTCARLDDLLNWGRKGSLWPLTFGLACCAVEMMHIAAPRYDMDRYG 106
            :||..|.|..       .|:..:::|||:||.|.||:||:|||||||||||||..|.|||:||:|
plant    55 SPPPPGLSKA-------AEFVISKVDDLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFG 112

  Fly   107 VVFRASPRQADVLIVAGTLTNKMAPAFRKIYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDR 171
            ::||.||||:|.:|||||||||||||.||:|||||||||||||||||||||||||||||||||||
plant   113 IIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDR 177

  Fly   172 IVPVDIYVPGCPPTAEALMYGILQLQKKVKRMRTLQMWYRK 212
            ||||||||||||||||||:||:||||||:.|.:....|:.|
plant   178 IVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWNK 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-20LNP_651698.1 PRK06411 64..204 CDD:235797 114/139 (82%)
AT5G11770NP_196738.1 PRK06411 67..215 CDD:235797 114/147 (78%)

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