DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trc8 and RNFT1

DIOPT Version :9

Sequence 1:NP_996303.1 Gene:Trc8 / 43476 FlyBaseID:FBgn0039668 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_057209.3 Gene:RNFT1 / 51136 HGNCID:30206 Length:435 Species:Homo sapiens


Alignment Length:332 Identity:68/332 - (20%)
Similarity:117/332 - (35%) Gaps:110/332 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   378 FQWYLLTYDDEEKSLG-----TVSAVLFYILALQTGLTSLSPDKRFIRLCRNLCLLMTALLHFLH 437
            |:|.       :|||.     :|..|:.:|..:..|:.                 |:|..::...
Human   148 FKWL-------QKSLPYILILSVKLVMQHITGISLGIG-----------------LLTTFMYANK 188

  Fly   438 NIVSPILMSLSAARNPSRKRHVRALSVCAFLVVL---SVSLLYHLWSQQSI-------------- 485
            :||:.:.:     |..|.|..      ||:|:|.   |..|||:.:..||:              
Human   189 SIVNQVFL-----RERSSKIQ------CAWLLVFLAGSSVLLYYTFHSQSLYYSLIFLNPTLDHL 242

  Fly   486 ----STWLLAVTAFSVE---VVVKVLVSLAT----------YTLFLLDARRQFF--------WEK 525
                ..|::.:|.|.::   :.:|.|:.|..          |...||:...|::        |.:
Human   243 SFWEVFWIVGITDFILKFFFMGLKCLILLVPSFIMPFKSKGYWYMLLEELCQYYRTFVPIPVWFR 307

  Fly   526 LDDYLYYVRAFGNSVEFCFGILLFINGAWILIFESAQNATGGGIRAIMMCIHAYFNIWCEARAGW 590
               ||.....|||...:..||||.:....:.:.|..     |.:|.....:..:|     .:..:
Human   308 ---YLISYGEFGNVTRWSLGILLALLYLILKLLEFF-----GHLRTFRQVLRIFF-----TQPSY 359

  Fly   591 SVFMKRRSAVHKISALPEATPAQLQAFDDVCAICYQEMYSAKITRCRHFFHGVCLRKWLYVQDRC 655
            .|...:|               |....||:|:||..|.....:..|:|.|...|:..|...:..|
Human   360 GVAASKR---------------QCSDVDDICSICQAEFQKPILLICQHIFCEECMTLWFNREKTC 409

  Fly   656 PLCHEIM 662
            |||..::
Human   410 PLCRTVI 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trc8NP_996303.1 TRC8_N 122..590 CDD:290425 50/258 (19%)
zf-rbx1 <618..659 CDD:289448 14/40 (35%)
zf-RING_2 619..659 CDD:290367 13/39 (33%)
RNFT1NP_057209.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62
Required for ubiquitin ligase activity and for protection against ER stress-induced cell death. /evidence=ECO:0000269|PubMed:27485036 368..419 15/49 (31%)
RING 375..416 CDD:238093 13/40 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5243
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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