Protein Alignment Trc8 and Rnft1

DIOPT Version :9

• Sequence 1: NP_996303.1
• Gene: Trc8 / 43476
• FlyBaseID: FBgn0039668
• Length: 809
• Species: Drosophila melanogaster
• Sequence 2: XP_003750947.1
• Gene: Rnft1 / 360595
• RGDID: 1562411
• Length: 397
• Species: Rattus norvegicus
• Alignment Length: 347
• Identity: 72/347 - (20%)
• Similarity: 121/347 - (34%)
• Gaps: 116/347 - (33%)

  Fly   364 TGVISMFCHYIGRGFQW------YLLTYDDEEKSLGTVSAVLFYILALQTGLTSLSPDKRFIRLC 422
            :|..|.| .|:   |:|      |:|.       || :..|:.:|..:..|:.
  Rat   100 SGSFSEF-RYL---FKWLQKSLPYILI-------LG-IKLVMQHITGISLGIG------------ 140

  Fly   423 RNLCLLMTALLHFLHNIVSPILMSLSAARNPSRKRHVRALSVCAFLVVL---SVSLLYHLWSQQS 484
                 |:|..::...:||:.:.:     |..|.|..      ||:|:|.   |..|||:.:..||
  Rat   141 -----LLTTFMYANKSIVNQVFL-----RERSSKLR------CAWLLVFLAGSSVLLYYTFHSQS 189

  Fly   485 IS------------------TWLLAVTAFSVE---VVVKVLVSLAT----------YTLFLLDAR 518
            :.                  .|::.:|.|.::   :.:|.||.|..          |...||:..
  Rat   190 LHYSLIFLNPTLEQLSFWEVLWIVGITDFILKFFFMGLKCLVLLVPSFIVPFKSKGYWYMLLEEL 254

  Fly   519 RQFF--------WEKLDDYLYYVRAFGNSVEFCFGILLFINGAWILIFESAQNATGGGIRAIMMC 575
            .|::        |.:   ||.....|||...:..||||.:....:.:.:..     |.:|.....
  Rat   255 CQYYRIFVPIPVWFR---YLISYGEFGNVTTWSLGILLALLYLILKLLDFF-----GHLRTFRQV 311

  Fly   576 IHAYFNIWCEARAGWSVFMKRRSAVHKISALPEATPAQLQAFDDVCAICYQEMYSAKITRCRHFF 640
            :..:|     .|..:.|               .|:..|....|.:|.||..|.....:..|:|.|
  Rat   312 LRIFF-----TRPSYGV---------------PASKRQCSDMDGICPICQAEFQKPVLLFCQHIF 356

  Fly   641 HGVCLRKWLYVQDRCPLCHEIM 662
            ...|:..|...:..||||..::
  Rat   357 CEECITLWFNREKTCPLCRTVI 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Trc8	NP_996303.1	TRC8_N	122..590	CDD:290425	55/273 (20%)
		zf-rbx1	<618..659	CDD:289448	13/40 (33%)
		zf-RING_2	619..659	CDD:290367	12/39 (31%)
Rnft1	XP_003750947.1	RING	337..378	CDD:238093	13/40 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5243
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900