Sequence 1: | NP_996303.1 | Gene: | Trc8 / 43476 | FlyBaseID: | FBgn0039668 | Length: | 809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_492602.2 | Gene: | hrdl-1 / 172833 | WormBaseID: | WBGene00009164 | Length: | 579 | Species: | Caenorhabditis elegans |
Alignment Length: | 431 | Identity: | 97/431 - (22%) |
---|---|---|---|
Similarity: | 160/431 - (37%) | Gaps: | 84/431 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 276 AMEASRTVYNGYQYAMNFVSNFGLSALIENEWQRLNVPNVLRVFWTIRLIQGGYALATTESDEPL 340
Fly 341 DLMTATQ---KLLVDGCETMTAVLGMTGVISMFCHYIGRGFQWYLLTYDDEEKSLGTVSAVLFYI 402
Fly 403 LALQTGLTSLS----PDK--RFI--RLCRNLCLLMTALLHFLHNIVSPILMSLSAARNPSRKRHV 459
Fly 460 RALS-VCAFLVVLSVSLLYHLWSQQSISTWLLAVTAFSVEVVVKVLVSLATYTLF-LLDARRQFF 522
Fly 523 W--EKLDDYLYYVRAFGNSVEFCFGILLFINGAWILIFESAQNATGGGIRAIMMCIHAYFNIWCE 585
Fly 586 ARAGWSVFMKRRSAVHKISALPEATPAQLQAF--DDVCAICYQEMYSAKITRCRHFFHGVCLRKW 648
Fly 649 LYVQDRCPLCHEIMMYTDKADENAPEAEPAPAAQAEQPMRI 689 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Trc8 | NP_996303.1 | TRC8_N | 122..590 | CDD:290425 | 73/328 (22%) |
zf-rbx1 | <618..659 | CDD:289448 | 14/40 (35%) | ||
zf-RING_2 | 619..659 | CDD:290367 | 13/39 (33%) | ||
hrdl-1 | NP_492602.2 | HRD1 | <200..>407 | CDD:227568 | 52/235 (22%) |
zf-RING_2 | 348..388 | CDD:290367 | 13/39 (33%) | ||
CUE_AMFR | 449..489 | CDD:270604 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5243 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D897451at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |