DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trc8 and rnf-145

DIOPT Version :10

Sequence 1:NP_996303.1 Gene:Trc8 / 43476 FlyBaseID:FBgn0039668 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_491382.2 Gene:rnf-145 / 172053 WormBaseID:WBGene00022471 Length:742 Species:Caenorhabditis elegans


Alignment Length:64 Identity:18/64 - (28%)
Similarity:27/64 - (42%) Gaps:10/64 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 HSIIT---KPPEELLKS--YDTLRTPLLEGCNDAEGILGLYILRRKTRGEDIRHLPGRLASKLF 397
            |.|:|   :.||.||.:  |.|.......||..||.:....|.:..:..:.:.|:     .|||
 Worm   180 HEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELVTNQAIFQGDSELQQLLHI-----FKLF 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trc8NP_996303.1 TRC8_N 8..590 CDD:463960 18/64 (28%)
RING-H2_RNF139-like 619..659 CDD:438139
rnf-145NP_491382.2 TRC8_N 49..556 CDD:463960 18/64 (28%)
RING-H2_RNF139-like 590..631 CDD:438139
Blue background indicates that the domain is not in the aligned region.

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