DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trc8 and sip3

DIOPT Version :10

Sequence 1:NP_996303.1 Gene:Trc8 / 43476 FlyBaseID:FBgn0039668 Length:809 Species:Drosophila melanogaster
Sequence 2:XP_061507626.1 Gene:sip3 / 1273849 VectorBaseID:AGAMI1_005093 Length:702 Species:Anopheles gambiae


Alignment Length:394 Identity:90/394 - (22%)
Similarity:148/394 - (37%) Gaps:115/394 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 FLVVLSVSLLYHLWSQ--QSISTWLLAVTAFSVEVVVKVLVSLATYTLFLLDARRQFFW---EKL 526
            ||..|..:...||..:  .:::...||.|.|..:...| .|:|.|..|||    :.|.|   :::
Mosquito    64 FLGTLRAAEFEHLMERFWYALTETCLAFTVFRDDFNPK-FVALFTVLLFL----KSFHWLAEDRV 123

  Fly   527 D--------DYLYYVR------------------------AFGNSVEFCFG------ILLFINGA 553
            |        .:|::||                        |.|.:|:..||      :.:.||.|
Mosquito   124 DYMERSPVIGWLFHVRVAGLLLCLGLFDYELISYAYQSTIAKGVTVQLVFGFEYAILMTMVINTA 188

  Fly   554 WILIFESAQNATG-----------------GGIRAIMMCIHA-----------------YFNIWC 584
            ...||.:|:..:.                 |..|.::..:..                 |:.:..
Mosquito   189 IKYIFHAAELRSDTPWENKAVFLLYTELIIGFTRVVLYVVFVILMVKIFTLPMFAFRPMYYTMRN 253

  Fly   585 EARAGWSVFMKRRSAVHKISALPEATPAQLQAFDDVCAICYQEMYS-AKITRCRHFFHGVCLRKW 648
            ..:|...|.:.||:..:..:..|:|||.:||..|::|.||.::|.| :|...|.|.||..|||.|
Mosquito   254 FKKALNDVILSRRAIRNMNTLYPDATPEELQMSDNICIICREDMVSNSKKLPCGHIFHTACLRSW 318

  Fly   649 LYVQDRCPLCHEIMMYTDKADENAPEAEPAPAAQAEQPMRIYPRDDANNAAAQRRSPERAPVEAS 713
            ...|..||.|...::.|......| ...|||...|         :||||.|              
Mosquito   319 FQRQQTCPTCRLNILRTPITAATA-AVNPAPNNNA---------NDANNGA-------------- 359

  Fly   714 EQAPATSSSSAAATIGAEAVSAIVESAAAVGEARSLVSVASSSSATHRISASGSSDSSYMTASAQ 778
              ..||.:.::..|:.|.:|:.....|..||      :||:.::..:.::|:|::.......:..
Mosquito   360 --GGATGNDASRPTVVAGSVAGTAGVAGGVG------AVAAGAALPNGLTATGTNAMPLFPPAPM 416

  Fly   779 SPPP 782
            ..||
Mosquito   417 VLPP 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trc8NP_996303.1 TRC8_N 8..590 CDD:463960 37/199 (19%)
RING-H2_RNF139-like 619..659 CDD:438139 17/40 (43%)
sip3XP_061507626.1 None

Return to query results.
Submit another query.