DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FipoQ and GRR1

DIOPT Version :10

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_012623.1 Gene:GRR1 / 853552 SGDID:S000003850 Length:1151 Species:Saccharomyces cerevisiae


Alignment Length:558 Identity:114/558 - (20%)
Similarity:203/558 - (36%) Gaps:152/558 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IEKLPDKVLLHIFSYLSHREICRLARICR---RWRQIAYDTR---LWKNVSLRPEVSGLHVG--- 89
            |..|..|:|..|..|..     .|...|.   |.:|:...|.   :|.|.....|.|.|..|   
Yeast   224 IRNLRLKILTIIEEYKK-----SLYAYCHSKLRGQQVENPTDNFIIWINSIDTTESSDLKEGLQD 283

  Fly    90 ----SLEMLLQLIS-----------VRFGPTLRYIELPIELITHTVLHELSAKCPNLTHMLLDFS 139
                |.:.:..::|           .|..|......||.|:: |.:|.:|:.|     :.::.|.
Yeast   284 LSRYSRQFINNVLSNPSNQNICTSVTRRSPVFALNMLPSEIL-HLILDKLNQK-----YDIVKFL 342

  Fly   140 TAMQL---------------HDFSEMQAFPTKLRYMCVCLSEVIFMEGFMRKIYNF------ING 183
            |..:|               :..|::..|   ||.|.:...|.:|....|.|..||      ::.
Yeast   343 TVSKLWAEIIVKILYYRPHINKKSQLDLF---LRTMKLTSEETVFNYRLMIKRLNFSFVGDYMHD 404

  Fly   184 LEVLHLIGTYEKCEEEEE------------EIYEVINVHKLKSATPNLRVINLYGINFIDDSHID 236
            .|:.:.:|    |:..|.            .|..|:...|.      |:.:::.||..:.|...|
Yeast   405 TELNYFVG----CKNLERLTLVFCKHITSVPISAVLRGCKF------LQSVDITGIRDVSDDVFD 459

  Fly   237 AFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLMNGTSLKSEFVMQAEWDKC-ALQELD 300
            ..::.|.:::...|.....||..:|:..|..|..|..:.:...:..::.:::...:|| .|.|:|
Yeast   460 TLATYCPRVQGFYVPQARNVTFDSLRNFIVHSPMLKRIKITANNNMNDELVELLANKCPLLVEVD 524

  Fly   301 IT-ATDLSTECLVDMLSRIPSLKFLSAGQINGFNDSVLKQWMESGTTRSLISLDLDSSDNISDEG 364
            || :.:::...|:.:|:|:..|:...........|::.:                :.|..:.|..
Yeast   525 ITLSPNVTDSSLLKLLTRLVQLREFRITHNTNITDNLFQ----------------ELSKVVDDMP 573

  Fly   365 LLKFIQRQGHQLSACCLSGMPHITDQLWMSILPL--------LGNCKIIV---MGTAEKLGVNIH 418
            .|:.|.          |||..:|||:...||:.|        ||.|..|.   :....|||.|:.
Yeast   574 SLRLID----------LSGCENITDKTIESIVNLAPKLRNVFLGKCSRITDASLFQLSKLGKNLQ 628

  Fly   419 VDQLMDTIASNCGNLERLELRWDPDNLRFSDKSQKAI--DILRVKCLKLRCMV-LSDGRYYETVK 480
            ....     .:|.|:              :|...:|:  ...|::.:...|.. |::...||.  
Yeast   629 TVHF-----GHCFNI--------------TDNGVRALFHSCTRIQYVDFACCTNLTNRTLYEL-- 672

  Fly   481 ANFERADRITVVRTTTCCRVSPYHL-----LRNYNDLI 513
            |:..:..||.:|:   |.:::...|     ||..||.:
Yeast   673 ADLPKLKRIGLVK---CTQMTDEGLLNMVSLRGRNDTL 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FipoQNP_733291.1 F-box-like 34..78 CDD:463757 13/49 (27%)
ING 110..>166 CDD:355795 15/70 (21%)
leucine-rich repeat 131..156 CDD:275381 5/39 (13%)
leucine-rich repeat 157..175 CDD:275381 5/17 (29%)
leucine-rich repeat 219..244 CDD:275381 6/24 (25%)
leucine-rich repeat 245..270 CDD:275381 6/24 (25%)
leucine-rich repeat 271..295 CDD:275381 3/24 (13%)
leucine-rich repeat 296..320 CDD:275381 8/24 (33%)
leucine-rich repeat 321..348 CDD:275381 2/26 (8%)
leucine-rich repeat 349..375 CDD:275381 4/25 (16%)
leucine-rich repeat 376..403 CDD:275381 11/34 (32%)
GRR1NP_012623.1 F-box-like 320..361 CDD:463757 10/46 (22%)
AMN1 404..559 CDD:187754 31/164 (19%)
leucine-rich repeat 416..441 CDD:275381 3/24 (13%)
leucine-rich repeat 442..467 CDD:275381 6/24 (25%)
leucine-rich repeat 494..519 CDD:275381 3/24 (13%)
leucine-rich repeat 520..545 CDD:275381 8/24 (33%)
leucine-rich repeat 546..574 CDD:275381 4/43 (9%)
AMN1 <574..737 CDD:187754 38/168 (23%)
leucine-rich repeat 575..600 CDD:275381 11/34 (32%)
leucine-rich repeat 601..626 CDD:275381 7/24 (29%)
leucine-rich repeat 627..652 CDD:275381 4/43 (9%)
leucine-rich repeat 653..677 CDD:275381 5/25 (20%)
leucine-rich repeat 678..704 CDD:275381 7/28 (25%)
leucine-rich repeat 707..732 CDD:275381 0/1 (0%)

Return to query results.
Submit another query.