DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FipoQ and Fbxl22

DIOPT Version :10

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_780415.1 Gene:Fbxl22 / 74165 MGIID:1921415 Length:236 Species:Mus musculus


Alignment Length:243 Identity:51/243 - (20%)
Similarity:78/243 - (32%) Gaps:76/243 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IEKLPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWKNVSLRPEVSGLHVGSLEMLLQLI 98
            |.:|..:.||.:||:|.......|:|.|.:.|.:..|..||..         ||..||.. |:..
Mouse     3 ITQLNRECLLCLFSFLDKDSRRSLSRTCSQLRDVFEDPTLWPL---------LHFHSLAE-LKKD 57

  Fly    99 SVRFGPTLRYIELPIELITHTVLHELSAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYMCVC 163
            :.|..|.||    .:.:..|:                            |.:|          ||
Mouse    58 NFRLSPALR----SLSICWHS----------------------------SRVQ----------VC 80

  Fly   164 LSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLK--SATPNLRVINLYG 226
            ..|........|.|                  |.:.|    .::|...|:  :..|||..:.|.|
Mouse    81 SIEDWLKSALQRSI------------------CSQHE----SLVNDFLLQVCNRCPNLTSVTLSG 123

  Fly   227 INFIDDSHIDAFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCL 274
            ...:.|..:.....:|.:|..|.:..|.:||..||..:....:.|..|
Mouse   124 CGHVTDDCLARLLLSCPRLRTLRLENCARVTNRTLAAVAAHGRALQTL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FipoQNP_733291.1 F-box-like 34..78 CDD:463757 14/43 (33%)
ING 110..>166 CDD:355795 5/55 (9%)
leucine-rich repeat 131..156 CDD:275381 2/24 (8%)
leucine-rich repeat 157..175 CDD:275381 3/17 (18%)
leucine-rich repeat 219..244 CDD:275381 5/24 (21%)
leucine-rich repeat 245..270 CDD:275381 7/24 (29%)
leucine-rich repeat 271..295 CDD:275381 2/4 (50%)
leucine-rich repeat 296..320 CDD:275381
leucine-rich repeat 321..348 CDD:275381
leucine-rich repeat 349..375 CDD:275381
leucine-rich repeat 376..403 CDD:275381
Fbxl22NP_780415.1 F-box_FBXL22 3..45 CDD:438901 14/41 (34%)
LRR 1 15..40 7/24 (29%)
LRR 2 43..72 10/42 (24%)
AMN1 45..>200 CDD:187754 37/201 (18%)
LRR 3 98..123 7/28 (25%)
leucine-rich repeat 116..141 CDD:275381 5/24 (21%)
LRR 4 124..149 4/24 (17%)
leucine-rich repeat 142..167 CDD:275381 7/24 (29%)
LRR 5 150..175 7/22 (32%)
leucine-rich repeat 168..193 CDD:275381 2/4 (50%)
LRR 6 176..201
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.