DRSC/TRiP Functional Genomics Resources

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Protein Alignment FipoQ and Fbxo33

DIOPT Version :9

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001028328.2 Gene:Fbxo33 / 70611 MGIID:1917861 Length:562 Species:Mus musculus


Alignment Length:533 Identity:95/533 - (17%)
Similarity:197/533 - (36%) Gaps:156/533 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWKNVSLRPEVSGLHVGSLEMLLQLISVR 101
            ||.::::||||:|...:..|.:..|..||:..:...||..:.:...||......||.|::    :
Mouse    74 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMR----K 134

  Fly   102 FGPTLRYIELPIELITHTVLH--------------------------ELSAKCPNLTHMLLDFST 140
            .|..:|  ||.:|......|.                          :||::...:..:.|:.  
Mouse   135 CGWFVR--ELRVEFAAENYLSGGGGPGDGGSGGGTDTGTGGEDGEALQLSSRWLEVLRIYLEL-- 195

  Fly   141 AMQLHDFSEMQAFPTKLRYMCVCLSEVIFMEGFMRKIYNFINGLEVLH----LIGTY-------- 193
                              .:||.||  |.....::| ::....:.|:|    |..||        
Mouse   196 ------------------VLCVLLS--IRNNRNLQK-FSLFGDISVVHQQGSLSSTYLSRVDPDG 239

  Fly   194 EKCEEEEEEIYEVI-NVHKLK--SATPNLRVINLYGINFIDD------SHIDAFSSNC------- 242
            :|.::.::...|:: |..:||  |....|.::....::.:.:      .|:....:|.       
Mouse   240 KKIKQIQQLFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNPIANTMEHLSLLDNNIPGNSTLI 304

  Fly   243 --------IQLECLAVNFCNKVTGSTLKTLIQRS----KRLTCLLMNGT-SLKS--EFVMQAEWD 292
                    :.|..||::||: .|....:.|...:    :||:.|:.|.: .|||  .......|.
Mouse   305 TAVELERFVNLRSLALDFCD-FTAEMARVLTDSNHVPLQRLSLLVHNASVMLKSLDNMPNDEHWK 368

  Fly   293 ----KCALQELDITATDLSTECLVDMLSRIPSL--------KFLSAGQINGFNDSVLKQWMESGT 345
                |.:...:.:...|:.:|.::.:|.  ||:        .:::.  ::|....::.:..:...
Mouse   369 ALSRKSSSLRVYLMVFDIKSEDMLKILK--PSIPLERVHFDSYVTC--VSGAIVDLISRQYDKFL 429

  Fly   346 TRSLISLDL-------DSSDNISDEGLLKFIQRQGHQLSACCLSGMPHITDQLW----MSILPLL 399
            |..::..|:       |.|||.:::.|:....| ..:|:...:.|.     .:|    ::|..|.
Mouse   430 THFILMNDMIDTSGFPDLSDNRNEDPLVLLAWR-CTKLTLLAIHGY-----TVWAHNLIAIARLR 488

  Fly   400 GNCKIIVMGTAEKLGVNIHVDQ-------------LMDTIASNCG-------NLERLELRWDPDN 444
            |:...::..|.|    :|..||             |::.::...|       ::|.|.:..:|:.
Mouse   489 GSDLKVLQVTEE----SIDFDQGELADQDVDPVQNLIEQVSLGLGQSWHAVLDIESLSVFTEPNR 549

  Fly   445 LRFSDKSQKAIDI 457
            ..:.:....:.||
Mouse   550 HFYREMQSFSEDI 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FipoQNP_733291.1 F-box-like 34..80 CDD:289689 13/42 (31%)
leucine-rich repeat 131..156 CDD:275381 1/24 (4%)
leucine-rich repeat 157..175 CDD:275381 5/17 (29%)
leucine-rich repeat 219..244 CDD:275381 3/45 (7%)
leucine-rich repeat 245..270 CDD:275381 7/28 (25%)
leucine-rich repeat 271..295 CDD:275381 8/30 (27%)
leucine-rich repeat 296..320 CDD:275381 3/23 (13%)
leucine-rich repeat 321..348 CDD:275381 2/34 (6%)
leucine-rich repeat 349..375 CDD:275381 7/32 (22%)
leucine-rich repeat 376..403 CDD:275381 6/30 (20%)
leucine-rich repeat 405..432 CDD:275381 7/46 (15%)
Fbxo33NP_001028328.2 F-box-like 72..119 CDD:289689 13/44 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 155..176 0/20 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR20933
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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