Protein Alignment FipoQ and Fbxl18

DIOPT Version :9

• Sequence 1: NP_733291.1
• Gene: FipoQ / 43475
• FlyBaseID: FBgn0039667
• Length: 515
• Species: Drosophila melanogaster
• Sequence 2: XP_006248969.1
• Gene: Fbxl18 / 678726
• RGDID: 1596958
• Length: 707
• Species: Rattus norvegicus
• Alignment Length: 445
• Identity: 90/445 - (20%)
• Similarity: 162/445 - (36%)
• Gaps: 116/445 - (26%)

  Fly    31 DTTIEKLPDKVLLHIFSYLSHRE-ICRLARICRRWRQIAYDTRLWKNVSLRPEVSGLHVGSLEML 94
            ||.:....|::||||.|::...: :..:.|.||:...:..|..|...|.|:.:    :..|.|.:
  Rat    14 DTHLLGFSDEILLHILSHVPSTDLVLNVRRTCRKLAALCLDKSLVHTVLLQKD----YQASEEKV 74

  Fly    95 LQLISVRFGPTLRYIE------LPIELITHTVLHELSAKCPNLTHMLLD--FSTAMQLHDFSEMQ 151
            .||:. ..|..::.:.      ||...|.|.      |:|.:|..:.|.  ..|:::|   |.:.
  Rat    75 KQLVK-EIGREIQQLNMAGCYWLPGSTIEHV------ARCHSLVKVNLSGCHLTSLRL---SRVL 129

  Fly   152 AFPTKLRYMCVCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSAT 216
            :...:||.:.:.:|.                |.:...|   ..:|:.....:.|:    |....|
  Rat   130 SCLQRLRSLAIDVSP----------------GFDASQL---SSECKATLSRVQEL----KQTLFT 171

  Fly   217 PNLRVINLYGINFIDDSHIDAFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKR---LTCLLMNG 278
            |:..|:..                 |..|:.|.:.|          .::.|::.   |:..||.|
  Rat   172 PSYGVVPC-----------------CASLQKLLLYF----------EILDRTREGAVLSGQLMVG 209

  Fly   279 TSLKSEFV-MQAEWDKCALQELDITATDLSTECLVDMLSRIPSLKFLSAGQINGFNDSVLKQWME 342
            .|....:. ::..:.:.|...::.....|....|.|   |.|.       .::.|..||...:.|
  Rat   210 QSNVPHYQNLRVFYARLAPGYINQEVVRLYLAVLSD---RTPE-------NLHAFLISVPGSFAE 264

  Fly   343 SGTTRSLISLDLDS-SDNISDEGL---------------LKFIQRQGHQLSACCLSGMPHITDQL 391
            ||.|::|    ||| :.|::.:.|               :||........|.|.||| .|:..:|
  Rat   265 SGATKNL----LDSMARNVALDALQLPKSWLNGSTLLQHMKFNNPFYFSFSRCTLSG-GHLIQRL 324

  Fly   392 WMSILPLLGNCKIIVMGTAEKLGVNI-------HVD-QLMDTIASNCGNLERLEL 438
            ......|.....:.:.|....|..:.       .:| .:::|:..:|.||..|.|
  Rat   325 INGGKDLRSLASLNLSGCVHCLSADSLLRKAEDDIDSSILETLVESCCNLHHLNL 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
FipoQ	NP_733291.1	F-box-like	34..80	CDD:289689	12/46 (26%)
		leucine-rich repeat	131..156	CDD:275381	5/26 (19%)
		leucine-rich repeat	157..175	CDD:275381	3/17 (18%)
		leucine-rich repeat	219..244	CDD:275381	2/24 (8%)
		leucine-rich repeat	245..270	CDD:275381	4/24 (17%)
		leucine-rich repeat	271..295	CDD:275381	5/24 (21%)
		leucine-rich repeat	296..320	CDD:275381	4/23 (17%)
		leucine-rich repeat	321..348	CDD:275381	7/26 (27%)
		leucine-rich repeat	349..375	CDD:275381	8/41 (20%)
		leucine-rich repeat	376..403	CDD:275381	8/26 (31%)
		leucine-rich repeat	405..432	CDD:275381	5/34 (15%)
Fbxl18	XP_006248969.1	F-box-like	22..64	CDD:289689	12/41 (29%)
		leucine-rich repeat	334..373	CDD:275381	5/38 (13%)
		leucine-rich repeat	374..403	CDD:275381	3/6 (50%)
		leucine-rich repeat	404..473	CDD:275381
		leucine-rich repeat	522..548	CDD:275381
		leucine-rich repeat	549..578	CDD:275381
		leucine-rich repeat	579..604	CDD:275381
		leucine-rich repeat	605..629	CDD:275381

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166346607
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930