DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FipoQ and Fbxl17

DIOPT Version :9

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_056609.1 Gene:Fbxl17 / 50758 MGIID:1354704 Length:701 Species:Mus musculus


Alignment Length:427 Identity:98/427 - (22%)
Similarity:178/427 - (41%) Gaps:69/427 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 IEKLPDKVLLHIFSYLSHREICRLAR-ICRRWRQIAYDTRLWKNVSL--RPEVSGLHVGSLEMLL 95
            |.:||..:||.|||.||..|.|..|. :|:.||.:..|.:.||.:.|  |.:|:       :.||
Mouse   321 INQLPPSILLKIFSNLSLNERCLSASLVCKYWRDLCLDFQFWKQLDLSSRQQVT-------DELL 378

  Fly    96 QLISVRFGPTLRYIELPI---ELITHTVLHELSAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKL 157
            :.|:.|   :...||:.|   ..::.:.:..|:.|||.|...     ||                
Mouse   379 EKIASR---SQNIIEINISDCRSLSDSGVCVLAFKCPGLLRY-----TA---------------- 419

  Fly   158 RYMCVCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSATPNLRVI 222
             |.|..||:...:     .:.:....|:.:| :|..:|..:|        .:.:|.|....|:.|
Mouse   420 -YRCKQLSDTSII-----AVASHCPLLQKVH-VGNQDKLTDE--------GLKQLGSRCRELKDI 469

  Fly   223 NLYGINFIDDSHIDAFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLMNGTSLKSEFVM 287
            :......|.|..:...:.:|::|:.:.:.....||..::|...:....|..:...|.|:.|:.|:
Mouse   470 HFGQCYKISDEGMIVIAKSCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGCSVTSKGVI 534

  Fly   288 QAEWDKCALQELDIT-ATDLSTECLVDMLSRIPSLKFLSAGQINGFNDSVLKQWMESGTTRSLIS 351
            .....: .|..||:. .|:|..|.:::::.|..:|..|:.......||..::...:.|  ::|..
Mouse   535 HLTKLR-NLSSLDLRHITELDNETVMEIVKRCKNLSSLNLCLNWIINDRCVEVIAKEG--QNLKE 596

  Fly   352 LDLDSSDNISDEGLLKFIQRQGHQLSACCLSGMPHITDQLWMSILPLLGNCKIIVMGTAEKLGVN 416
            |.|.|. .|:|..|:. |.|....:....:.....||||....|.....:.:.:.:...:|:. .
Mouse   597 LYLVSC-KITDYALIA-IGRYSVTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVN-E 658

  Fly   417 IHVDQLM--------DTIASNC-GNLER-LELRWDPD 443
            :.|:||:        .|:..:| ..||| .::.|.|:
Mouse   659 LTVEQLVQQYPHITFSTVLQDCKRTLERAYQMGWTPN 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FipoQNP_733291.1 F-box-like 34..80 CDD:289689 20/48 (42%)
leucine-rich repeat 131..156 CDD:275381 3/24 (13%)
leucine-rich repeat 157..175 CDD:275381 4/17 (24%)
leucine-rich repeat 219..244 CDD:275381 5/24 (21%)
leucine-rich repeat 245..270 CDD:275381 4/24 (17%)
leucine-rich repeat 271..295 CDD:275381 5/23 (22%)
leucine-rich repeat 296..320 CDD:275381 7/24 (29%)
leucine-rich repeat 321..348 CDD:275381 5/26 (19%)
leucine-rich repeat 349..375 CDD:275381 9/25 (36%)
leucine-rich repeat 376..403 CDD:275381 5/26 (19%)
leucine-rich repeat 405..432 CDD:275381 6/35 (17%)
Fbxl17NP_056609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..250
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..321 98/427 (23%)
F-box-like 321..368 CDD:289689 19/46 (41%)
leucine-rich repeat 362..387 CDD:275381 9/34 (26%)
leucine-rich repeat 388..413 CDD:275381 6/24 (25%)
AMN1 411..573 CDD:187754 39/198 (20%)
leucine-rich repeat 414..439 CDD:275381 7/51 (14%)
leucine-rich repeat 440..465 CDD:275381 7/33 (21%)
leucine-rich repeat 466..491 CDD:275381 5/24 (21%)
leucine-rich repeat 492..517 CDD:275381 4/24 (17%)
leucine-rich repeat 545..567 CDD:275381 6/21 (29%)
leucine-rich repeat 568..593 CDD:275381 5/26 (19%)
leucine-rich repeat 594..618 CDD:275381 9/25 (36%)
leucine-rich repeat 619..644 CDD:275381 5/24 (21%)
leucine-rich repeat 645..670 CDD:275381 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843131
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.