DRSC/TRiP Functional Genomics Resources

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Protein Alignment FipoQ and fbxl15

DIOPT Version :9

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_998107.1 Gene:fbxl15 / 405878 ZFINID:ZDB-GENE-040426-2440 Length:296 Species:Danio rerio


Alignment Length:294 Identity:61/294 - (20%)
Similarity:100/294 - (34%) Gaps:114/294 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 HI--DAFSS----NCIQLECLAVNFCNK-VTGSTLKTLIQRSKRLTCLLMNGTSLKSEFVMQAEW 291
            ||  :||.|    |.: |:.|:|..|:. :|.:.|..:|.::::|..:.:.|             
Zfish    70 HIPREAFCSILRHNQV
-LQHLSVTNCSDWITDTDLLPVIGQNQQLQHVDLRG------------- 120

  Fly   292 DKCALQELDITATDLSTECLVDMLSRIPSLKFLSAGQINGFNDSVLKQWMESGTTRSLI------ 350
              ||         .||...||.:....|.|:.||....         :|::|...|||.      
Zfish   121 --CA---------QLSRRALVAVSLSCPRLQHLSLAHC---------EWVDSLALRSLADHCPML 165

  Fly   351 -SLDLDSSDNISDEGLLKFIQRQGHQLSACCLSGMPHITDQLWMSILPLLGNCKIIVMGTAEKLG 414
             ||||.:...:.|              .|.|.                |.|.|..:   .|..:.
Zfish   166 RSLDLTACRQLKD--------------PAVCY----------------LAGKCPEL---RALSVA 197

  Fly   415 VNIHV-DQLMDTIASNCGNLERLELRWDPDNLRFSDKSQKAIDILRVKCLKLRCMVLSDGRYYET 478
            ||.:: |..::.:|..|..:|||:|                     ..||::|         .|.
Zfish   198 VNANITDTAVEEVAKKCREMERLDL---------------------TGCLRVR---------NEA 232

  Fly   479 VKANFERADRITVVRTTTCCRV--SPYHLLRNYN 510
            ::...|...::..::...|..|  |...:||..|
Zfish   233 IRTLAEYCPKLQSLKVNHCHNVTESSLGVLRRRN 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FipoQNP_733291.1 F-box-like 34..80 CDD:289689
leucine-rich repeat 131..156 CDD:275381
leucine-rich repeat 157..175 CDD:275381
leucine-rich repeat 219..244 CDD:275381 6/15 (40%)
leucine-rich repeat 245..270 CDD:275381 7/25 (28%)
leucine-rich repeat 271..295 CDD:275381 2/23 (9%)
leucine-rich repeat 296..320 CDD:275381 4/23 (17%)
leucine-rich repeat 321..348 CDD:275381 5/26 (19%)
leucine-rich repeat 349..375 CDD:275381 6/32 (19%)
leucine-rich repeat 376..403 CDD:275381 4/26 (15%)
leucine-rich repeat 405..432 CDD:275381 6/27 (22%)
fbxl15NP_998107.1 F-box 16..>52 CDD:279040
leucine-rich repeat 51..85 CDD:275381 6/14 (43%)
leucine-rich repeat 86..112 CDD:275381 7/25 (28%)
AMN1 <111..272 CDD:187754 48/252 (19%)
leucine-rich repeat 113..138 CDD:275381 8/48 (17%)
LRR 1 138..159 7/29 (24%)
leucine-rich repeat 139..164 CDD:275381 8/33 (24%)
LRR 2 164..185 7/50 (14%)
leucine-rich repeat 165..190 CDD:275381 10/54 (19%)
LRR 3 190..211 4/23 (17%)
leucine-rich repeat 191..216 CDD:275381 6/27 (22%)
LRR 4 216..237 8/50 (16%)
leucine-rich repeat 217..242 CDD:275381 9/54 (17%)
LRR 5 242..263 3/20 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588089
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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