DRSC/TRiP Functional Genomics Resources

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Protein Alignment FipoQ and fbxl3a

DIOPT Version :9

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001005773.3 Gene:fbxl3a / 378451 ZFINID:ZDB-GENE-030912-5 Length:431 Species:Danio rerio


Alignment Length:304 Identity:64/304 - (21%)
Similarity:112/304 - (36%) Gaps:89/304 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KLPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWKNVSL---RPEVSGLHVGSLEMLLQL 97
            :||.::|||||.||...:....:::|..|....:...||:....   :|..|.|.....:::.|:
Zfish    42 RLPQEILLHIFQYLPLLDRAFASQVCHNWNHAFHMPELWRCFEFELNQPATSYLKATHPDLIKQI 106

  Fly    98 ISVRFGPTLRYIELPIELITHT------VLHELSAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTK 156
            |. |....|:|:...::..|.:      :|.:| ..|...|..|:  |||.           |: 
Zfish   107 IK-RHSNHLQYVSFKVDSSTESAETACDILSQL-VNCSLKTLGLI--STAR-----------PS- 155

  Fly   157 LRYMCVCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSATPNLRV 221
                        |||  :.|.: ||:.|.|:                  .:|...|.|..     
Zfish   156 ------------FME--LPKSH-FISALTVV------------------FVNSKSLSSLK----- 182

  Fly   222 INLYGINFIDDSHID------AFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLMNGTS 280
                    |||:.:|      ..::|...|:.|.::.|..|:.:.:..:..:...|..|.:|...
Zfish   183 --------IDDTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHL 239

  Fly   281 LKSEFVMQAEWDK-CALQELDITATDLSTECLVDMLSRIPSLKF 323
            |..|.::....:| ..|:.|.|           |::|..|..:|
Zfish   240 LSDELLLALSSEKHVHLEHLRI-----------DVVSENPGQQF 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FipoQNP_733291.1 F-box-like 34..80 CDD:289689 13/46 (28%)
leucine-rich repeat 131..156 CDD:275381 6/24 (25%)
leucine-rich repeat 157..175 CDD:275381 3/17 (18%)
leucine-rich repeat 219..244 CDD:275381 5/30 (17%)
leucine-rich repeat 245..270 CDD:275381 4/24 (17%)
leucine-rich repeat 271..295 CDD:275381 6/24 (25%)
leucine-rich repeat 296..320 CDD:275381 5/23 (22%)
leucine-rich repeat 321..348 CDD:275381 1/3 (33%)
leucine-rich repeat 349..375 CDD:275381
leucine-rich repeat 376..403 CDD:275381
leucine-rich repeat 405..432 CDD:275381
fbxl3aNP_001005773.3 F-box-like 40..81 CDD:315592 12/38 (32%)
leucine-rich repeat 178..203 CDD:275381 7/37 (19%)
leucine-rich repeat 204..229 CDD:275381 4/24 (17%)
leucine-rich repeat 230..255 CDD:275381 6/24 (25%)
leucine-rich repeat 256..291 CDD:275381 7/28 (25%)
leucine-rich repeat 292..336 CDD:275381
leucine-rich repeat 337..363 CDD:275381
leucine-rich repeat 364..389 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588054
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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