Protein Alignment FipoQ and Fbxo39

DIOPT Version :9

• Sequence 1: NP_733291.1
• Gene: FipoQ / 43475
• FlyBaseID: FBgn0039667
• Length: 515
• Species: Drosophila melanogaster
• Sequence 2: NP_001034107.1
• Gene: Fbxo39 / 303287
• RGDID: 1311464
• Length: 443
• Species: Rattus norvegicus
• Alignment Length: 519
• Identity: 104/519 - (20%)
• Similarity: 178/519 - (34%)
• Gaps: 173/519 - (33%)

  Fly    22 DGTVRSPFADTTIEKLPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWK----NVSLRPE 82
            |..|..|...:....|||..|..:|.:|..|:..|.|.:||:|.||.|...||:    ..|.||
  Rat     4 DSEVTQPQDQSCWATLPDVCLRRVFWWLGDRDRSRAALVCRKWNQIMYSADLWRYRTITFSGRP- 67

  Fly    83 VSGLHVGSLEMLLQLISVRFGPTLRYIELPIELITHTVLHELSAKCPNLTHMLLDFSTAMQLHDF 147
             |.:|....|..|..:. :||   ||:|                      |:.:.|     |:.:
  Rat    68 -SRVHASEFESALWYVK-KFG---RYLE----------------------HLEIKF-----LNPY 100

  Fly   148 SEM--QAFPTKLRYMCVCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVH 210
            :.:  :.|...:|.:..||.          |..|.:..|.:.||        |.:..::.
  Rat   101 NAVLTKKFQVTMRGLLSCLG----------KSNNRLRSLSIQHL--------ELDRLVWR----- 142

  Fly   211 KLKSATPNLRVINLYGINFIDDSHIDAFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLT--- 272
                             |.|..|.|.:.|            |..|..|..|..|..:..|||
  Rat   143 -----------------NSIRGSLIKSLS------------FFLKKMGKHLDHLSLKGARLTVEQ 178

  Fly   273 -CLLMNGTS-LKSEFVM-----------------QAEWDKCALQELDITATDLSTECLVDMLSRI 318
             |.::|..| :::|.|.                 .::::|......::|...|:..|:.|.|  :
  Rat   179 GCHILNSLSYMRNENVASELNIEDFFSHHLAVYGSSQFNKAMATFHNLTFLTLNYNCISDEL--L 241

  Fly   319 PSLKFLSAGQINGFNDSVLK--------------QWMESGTTRSLISLDLDSSDNISDEGLLKFI 369
            .:|...:||.:...|   :|              .|.:.....|.:.:      |...|.::|:
  Rat   242 ETLSENNAGTLRTMN---IKCHVHDPHGQVVWGMSWAKLARQASNLKV------NFFFERVMKY- 296

  Fly   370 QRQGHQLSACCLSGMP---------HITDQLWMSILPLLGNCKIIVMGTAEKLGV---NIH--VD 420
                .:|:...|..:|         :.:|..| |:.|.|.:.......|.:||..   |.|  :|
  Rat   297 ----ERLARILLQEIPVRSISLRSCYFSDPDW-SMRPTLTDLLPTFRNTLQKLTFEFNNNHESLD 356

  Fly   421 QLMDTIASNCGNL------ERLELRWDPDNLRFSDKSQKAIDILRVKCLKLRCMVLSDGRYYET 478
            :.:..:...|..|      ..|::::....|:..::.|.::..|:|:....|         |||
  Rat   357 EQLHLLILACRKLFYFKIWAFLDVKFVERILKSQEEGQCSLRTLKVRIYTNR---------YET 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
FipoQ	NP_733291.1	F-box-like	34..80	CDD:289689	18/49 (37%)
		leucine-rich repeat	131..156	CDD:275381	4/26 (15%)
		leucine-rich repeat	157..175	CDD:275381	3/17 (18%)
		leucine-rich repeat	219..244	CDD:275381	5/24 (21%)
		leucine-rich repeat	245..270	CDD:275381	5/24 (21%)
		leucine-rich repeat	271..295	CDD:275381	8/45 (18%)
		leucine-rich repeat	296..320	CDD:275381	5/23 (22%)
		leucine-rich repeat	321..348	CDD:275381	6/40 (15%)
		leucine-rich repeat	349..375	CDD:275381	3/25 (12%)
		leucine-rich repeat	376..403	CDD:275381	8/35 (23%)
		leucine-rich repeat	405..432	CDD:275381	7/31 (23%)
Fbxo39	NP_001034107.1	F-box-like	16..57	CDD:403981	16/40 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1947
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900