DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FipoQ and fbxl13

DIOPT Version :9

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_017209779.1 Gene:fbxl13 / 101883454 ZFINID:ZDB-GENE-140106-120 Length:796 Species:Danio rerio


Alignment Length:490 Identity:102/490 - (20%)
Similarity:184/490 - (37%) Gaps:125/490 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWKNVSLRPEVSGLHVGSLEMLLQLISVR 101
            ||:::.|.||..|..|::.:.|::|:.|:.|...:.||..:...||.|.:....:|.:|:|..| 
Zfish   226 LPNRLFLKIFQSLGVRDLLKCAQVCQSWKAITQISSLWTEIDFSPESSWITDQMVERILRLHRV- 289

  Fly   102 FGPTLRYIELPIELITHTVLHELSAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKLRYMCVCLSE 166
                  |: :.:.|....::..||                     |..:..|             
Zfish   290 ------YV-ISVNLCGCNMVQRLS---------------------FRRISTF------------- 313

  Fly   167 VIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSATPNLRVINLYGINFID 231
             .|:......|:.|:|                    :.::.|....|....||:.::|.....::
Zfish   314 -TFIYQTTAFIFCFVN--------------------LIKIQNTFVFKGQCRNLQELDLSECPTVN 357

  Fly   232 DSHIDAFSSNCIQLECLAVNF-CNKVTGSTLKTLIQR---------------------------- 267
            |.::......|..|  |::|. |..:..:|:|.|..|                            
Zfish   358 DENMKMILEGCQSL--LSLNLACTHIANATIKVLASRCCVMLRSLNLAYCIHFSDKGLQYLTTGT 420

  Fly   268 -SKRLTCLLMNGTS--LKSEFVMQAEWDKC-ALQELDI----TATDLSTECLVDMLSRIPSLKFL 324
             .:||..|.::|.|  ....|...||  .| :||::.:    |.||:   |:..::||...|..:
Zfish   421 GCRRLRHLNLSGCSQITVDGFTSVAE--TCNSLQQIVLNDLPTLTDI---CVQVLVSRCRMLTVI 480

  Fly   325 SAGQINGFNDSVLKQWMESGTTRSLISLDLDSSDNISDEGLLKFIQRQGHQLSACCLSGMPHITD 389
            |..:....:|...|...|   ...|..:.::.:|.|:|.. :|.:.|...:||...||..|.:||
Zfish   481 SLLESLNLSDVAFKAVAE---VIDLTKILIEGNDVITDSS-VKALCRSCLKLSELHLSCCPRVTD 541

  Fly   390 QLWMSILPLLGNCKIIVMGTAEKLGVNIHVDQLMDTIASNCGNLERLELRWDPDNLRFSDKSQKA 454
            ..:.::..|...|.:.:.|..:...:.:|    ..|...:.|.|..|:|.:   .|:.:|.|.:.
Zfish   542 ACFKTLGNLTKLCNLNISGCFKVTDMGLH----YITEGPSAGQLRELDLSY---CLKITDLSLRR 599

  Fly   455 IDILRVKCLKLRCMVLSDGRYYETVKAN-FERADR 488
            |.   .||:.|..:.|.   :.|.:..| ||..|:
Zfish   600 IS---QKCISLTNLALC---FCENLTDNGFECLDK 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FipoQNP_733291.1 F-box-like 34..80 CDD:289689 13/42 (31%)
leucine-rich repeat 131..156 CDD:275381 2/24 (8%)
leucine-rich repeat 157..175 CDD:275381 1/17 (6%)
leucine-rich repeat 219..244 CDD:275381 4/24 (17%)
leucine-rich repeat 245..270 CDD:275381 8/54 (15%)
leucine-rich repeat 271..295 CDD:275381 8/26 (31%)
leucine-rich repeat 296..320 CDD:275381 8/27 (30%)
leucine-rich repeat 321..348 CDD:275381 5/26 (19%)
leucine-rich repeat 349..375 CDD:275381 6/25 (24%)
leucine-rich repeat 376..403 CDD:275381 8/26 (31%)
leucine-rich repeat 405..432 CDD:275381 3/26 (12%)
fbxl13XP_017209779.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588094
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288255at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.