DRSC/TRiP Functional Genomics Resources

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Protein Alignment FipoQ and fbxl21p

DIOPT Version :9

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_002935952.1 Gene:fbxl21p / 100489356 XenbaseID:XB-GENE-987711 Length:458 Species:Xenopus tropicalis


Alignment Length:299 Identity:63/299 - (21%)
Similarity:110/299 - (36%) Gaps:89/299 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LPDKVLLHIFSYLSHREICRLARICRRWRQIAYDTRLWKNVSL---RPEVSGLHVGSLEMLLQLI 98
            ||..|:||||.||...:..|.:.:||||.::.:...||:....   :|..|.|.....:::.|:|
 Frog    69 LPHHVVLHIFQYLPLVDRARASSVCRRWNEVFHIPELWRKFEFELNQPATSYLKSTHPDLIQQII 133

  Fly    99 SVRFGPTLRYIELPIELITHT------VLHELSAKCPNLTHMLLDFSTAMQLHDFSEMQAFPTKL 157
            . :....|:|:...::..|.:      :|.:| ..|...|..|:  |||              |.
 Frog   134 K-KHADHLQYVSFKVDSCTESAEAACDILSQL-VNCSIKTLGLI--STA--------------KP 180

  Fly   158 RYMCVCLSEVIFMEGFMRKIYNFINGLEVLHLIGTYEKCEEEEEEIYEVINVHKLKSATPNLRVI 222
            .:|.|..|             :|::.|.|:                  .:|...|.|..      
 Frog   181 SFMNVSKS-------------HFVSALTVV------------------FVNSKSLSSIK------ 208

  Fly   223 NLYGINFIDDSHID------AFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLMNGTSL 281
                   |||:.:|      ..::|...|:.|.::.|..|:.:.:..:..:...|..|.:|...|
 Frog   209 -------IDDTPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLL 266

  Fly   282 KSEFVMQAEWDK-CALQELDITATDLSTECLVDMLSRIP 319
            ..|.::....:| ..|:.|.|           |::|..|
 Frog   267 SDELLLALSTEKHVRLEHLRI-----------DVVSENP 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FipoQNP_733291.1 F-box-like 34..80 CDD:289689 16/45 (36%)
leucine-rich repeat 131..156 CDD:275381 5/24 (21%)
leucine-rich repeat 157..175 CDD:275381 3/17 (18%)
leucine-rich repeat 219..244 CDD:275381 5/30 (17%)
leucine-rich repeat 245..270 CDD:275381 4/24 (17%)
leucine-rich repeat 271..295 CDD:275381 6/24 (25%)
leucine-rich repeat 296..320 CDD:275381 6/24 (25%)
leucine-rich repeat 321..348 CDD:275381
leucine-rich repeat 349..375 CDD:275381
leucine-rich repeat 376..403 CDD:275381
leucine-rich repeat 405..432 CDD:275381
fbxl21pXP_002935952.1 F-box-like 66..109 CDD:372399 16/39 (41%)
leucine-rich repeat 204..229 CDD:275381 7/37 (19%)
leucine-rich repeat 230..255 CDD:275381 4/24 (17%)
leucine-rich repeat 256..281 CDD:275381 6/24 (25%)
leucine-rich repeat 282..316 CDD:275381 6/24 (25%)
leucine-rich repeat 327..363 CDD:275381
AMN1 <348..>422 CDD:187754
leucine-rich repeat 364..390 CDD:275381
leucine-rich repeat 391..416 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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