DRSC/TRiP Functional Genomics Resources

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Protein Alignment FipoQ and si:ch73-173p19.1

DIOPT Version :9

Sequence 1:NP_733291.1 Gene:FipoQ / 43475 FlyBaseID:FBgn0039667 Length:515 Species:Drosophila melanogaster
Sequence 2:XP_002660968.3 Gene:si:ch73-173p19.1 / 100332407 ZFINID:ZDB-GENE-130530-952 Length:918 Species:Danio rerio


Alignment Length:410 Identity:92/410 - (22%)
Similarity:156/410 - (38%) Gaps:116/410 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LRPEVSGLHVG--------------SLEMLLQLISVRFGPTLRYIELPIELITH---TVLHELS- 125
            |||....|..|              :.|:|.||.:......|.::..|  |||.   :||..|| 
Zfish   507 LRPRTLELFFGCPLQKFVLNCYPYTTNELLRQLRAFTCLKHLSFLNSP--LITDAGLSVLSNLSK 569

  Fly   126 ------AKCPNLTHMLLDFSTAMQLHDFSEMQAFPTK------LRYM-----CVC---LSEVIFM 170
                  :.|..||...|...|.::...|..:.  .||      |.|:     .:|   |::....
Zfish   570 LQHLNLSSCSKLTDSCLQHITGLRSLTFLALD--QTKVSDAGLLLYLQSGSSALCQLSLNQTAIT 632

  Fly   171 EGFMR-----------------KIYNF-----INGLEVLHLIGTYEKCEEEEEEIYEVINVHKLK 213
            |..:|                 |:.:.     :..|:.|||.||     ..:|...:.:..|   
Zfish   633 ESTLRVLPASVPQLRMLSIKHTKVSDVSALAELKNLQTLHLDGT-----GVQENSLQCLASH--- 689

  Fly   214 SATPNLRVINLYGINFIDDSH-IDAFSSNCIQLECLAVNFCNKVTGSTLKTLIQRSKRLTCLLMN 277
               |:|..::|.||...|.:| ::..:.  ::|..|.:...:.||.|.|..|.:::..|...|.:
Zfish   690 ---PSLSALSLAGIPVADGNHTLEIIAG--LRLTQLTLPGRHSVTDSGLSFLSRQTLLLELDLTD 749

  Fly   278 GTSLKSEFVMQ----AEWDKCA-------------------LQELDITATDLSTECLVDMLSRIP 319
            .|.|....:.|    ....|.:                   ||||.:..|.:::..:..:::.:|
Zfish   750 YTQLTDHGITQLSSMTRLKKLSLSNTQVSDSGLQGLIRLKELQELCLDRTAVTSRGVAALITHLP 814

  Fly   320 SLKF--LSAGQINGFNDSVLKQWMESGTTRSLISLDLDSSDNISDEGLLKFIQRQGHQLSACCLS 382
            .|:.  |::.|:   .|:|:::.:..  ...|:.|:| |...|:|:| |||:.|.  |||...|.
Zfish   815 HLQVMGLASTQV---GDTVIRRGLVH--CPQLLKLNL-SRTRITDQG-LKFLCRM--QLSQVNLD 870

  Fly   383 GMPHITDQLWMSILPLLGNC 402
            |    |....:.|..|:..|
Zfish   871 G----TGVTLVGIANLISAC 886

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity