DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2006 and Dtwd1

DIOPT Version :10

Sequence 1:NP_651693.2 Gene:CG2006 / 43472 FlyBaseID:FBgn0039664 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_017447067.1 Gene:Dtwd1 / 296119 RGDID:1311144 Length:354 Species:Rattus norvegicus


Alignment Length:308 Identity:111/308 - (36%)
Similarity:162/308 - (52%) Gaps:65/308 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PFVHMRIADHSALDTIE--GRHNCRLCNRSRKFFCYSCCVPVGEL-EELLPRLELPLQVDIIKHK 76
            |..|:.:|....|...:  ||..|..|..||.|:||:|.|||..: .|.:|.::|||::|||||.
  Rat    85 PLQHLCLASQEVLHKAQQSGRSRCLQCGGSRMFYCYTCYVPVENVPTEQIPFVQLPLKIDIIKHP 149

  Fly    77 KEIDGKSSAVHAAVLAPAHVRIHTFPDIPDYR-EEAGVVLIFPSATALAVPQL---FARNVQLQI 137
            .|.||||:||||.:|||..|.|:|:|.||:|. ::..|||:||...::::..:   ..:.::.:.
  Rat   150 NETDGKSTAVHAKLLAPDSVNIYTYPCIPEYEGQDHEVVLVFPGPQSISIKDVSFHLQKRIESKS 214

  Fly   138 GDNYGLPKGHHMGTMLRRRMDEVEVKE---LQEEVDE-PETVRRTWTLDNLPVRRAVFIDSTWNQ 198
            ||     |...: .|..|::...|.:|   |.|.:.: ||            ::|.|||||||:|
  Rat   215 GD-----KADDL-DMPPRKLVRTEAQEGWHLNESMGKGPE------------LKRVVFIDSTWSQ 261

  Fly   199 SRGIYADARVRGLRTVVLQNRLSQFWRHQRGSPRWYLATIEAIHQFLLEVHINAWGLNTAYRGLD 263
            :..|.:|.|:|.|..|.|:.|.:.|||||:|.|..:|:|||||:.||::.|          |.:.
  Rat   262 TNQITSDERLRELLQVELKTRKTCFWRHQKGKPDTFLSTIEAIYYFLVDYH----------RAVQ 316

  Fly   264 NLEITAGFHQLAEPLTKTAASENVGREAPYNGQYDNLLFFFAHMYDLI 311
            ..|                          |.|||||||||::.||.||
  Rat   317 KEE--------------------------YRGQYDNLLFFYSFMYRLI 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2006NP_651693.2 DTW 44..312 CDD:470119 101/277 (36%)
Dtwd1XP_017447067.1 DTW 116..339 CDD:461101 101/277 (36%)

Return to query results.
Submit another query.