DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp99A and Obsl1

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_017452317.1 Gene:Obsl1 / 363259 RGDID:1306073 Length:1897 Species:Rattus norvegicus


Alignment Length:507 Identity:102/507 - (20%)
Similarity:179/507 - (35%) Gaps:140/507 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 DTSEYICLVNDRHIP--EAIVDLLVQ-----DVPDP----PERPLLIS--FTSRSVNLSWAHSQH 165
            |..||:|...|..:.  .::.:|.||     .||:|    |..|:::|  .:..|.::||:|:.:
  Rat  1147 DAGEYVCETRDEAVTFNVSLAELPVQFLAPEAVPNPLCVVPGEPVMLSCELSRASAHVSWSHNGN 1211

  Fly   166 PRNAPVTHFIIETREGEDGIWEQLARIYTKTNATSYQVTGLTPFTVYSFRLLAVNKLGISPPSKE 230
            |         ::..||.:...|...||.. ..|.....||:  :|..|         |.:|.:..
  Rat  1212 P---------VKQGEGLELRAEGPRRILC-IQAADLAHTGV--YTCQS---------GTAPGAPS 1255

  Fly   231 SYYIVTLREAPTGKPIPTTAHNTSSTS--------VYISWKAPP------------PDTILGEFL 275
            ..:.|.:.|.|.....|..|.....::        |::|....|            ...:..|..
  Rat  1256 LSFNVQVAEPPVRVVAPEAAQTRVRSTPGGDLELVVHLSRPGGPVRWYKDGERLASQGRVQLEQA 1320

  Fly   276 GYRITYRPRDRDPNDTKEIYIRDNTVESHEIQNLQTYTQYKVTVQVFNPEGLGPETTILVMTDEG 340
            |.|...|.|.....|..| |:.|.:.:|.         .:.|:|:...|..|..|.|.|.: .||
  Rat  1321 GERQVLRVRGARRGDAGE-YLCDASQDSR---------IFIVSVEEPPPVKLVSELTPLTV-HEG 1374

  Fly   341 VPSKPQNLTILDVSANSITMSWHPPKNQNGAIA--GYHVFHIHDNQTGVEIVKNSR--------- 394
            ..:..|    .:||.....::|    .:||||.  |..:..:|...:...|::..:         
  Rat  1375 DDATFQ----CEVSPPDAEVTW----LRNGAIVTPGPQLEMVHSGSSRTLIIRGCQLKDAGTVTA 1431

  Fly   395 ----NSVETLIHF---ELQNLRPYTDYRVIVKAFTTKNEGEPSDQIAQRTDVGGPSAPAIVNLTC 452
                ......:|.   ||..||...|.|.        .||:......:...||.|.|        
  Rat  1432 RAGATDTSARLHVRETELLFLRRLQDVRA--------EEGQDVYLEVETGRVGAPGA-------- 1480

  Fly   453 HSQESITIRWRR-----PYEFYNTI--DFYIIKTRLAGQ----------DTHRD---IRINASAK 497
                   :||.|     |.:...|.  |.::.:..:.|.          ::|.|   .|::...:
  Rat  1481 -------VRWLRGGEPLPLDSRLTTAQDGHVHRLSIHGVLLTDQGTYGCESHHDRTLARLSVRPR 1538

  Fly   498 ELETAMILQNLTTNSYYEVKVAAATFSVINPKKIVLGKFSESRI-IQLQPNC 548
            :|.....|:::|.:     :..:|||.:...::.|.|::::..: :...|.|
  Rat  1539 QLRELRPLEDVTVH-----EGGSATFQLELSQEGVTGEWAQGGVRLHPGPKC 1585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 22/101 (22%)
fn3 249..331 CDD:278470 18/101 (18%)
FN3 342..437 CDD:238020 20/112 (18%)
FN3 442..520 CDD:238020 15/97 (15%)
PTPc 646..911 CDD:214550
PTPc 676..911 CDD:238006
PTPc 935..1186 CDD:214550
PTPc 963..1169 CDD:238006
Obsl1XP_017452317.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0613
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.