DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp99A and Ptprf

DIOPT Version :10

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_038966082.1 Gene:Ptprf / 360406 RGDID:3453 Length:1924 Species:Rattus norvegicus


Alignment Length:1404 Identity:377/1404 - (26%)
Similarity:591/1404 - (42%) Gaps:383/1404 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PATQAGRIFDVTNLDYVKVNAEAGKNVTIPCPGVN-EHSLVDTL---------VWKTASTTIAQF 84
            ||.....|....::.|..|:.|..|...:  .|:: |||..|.|         ||..|.|.:.. 
  Rat   637 PADSRNGIITQYSVAYEAVDGEDRKRHVV--DGISREHSSWDLLGLEKWTEYRVWVRAHTDVGP- 698

  Fly    85 ANRIPLLHSPRIQLLSDNFGLQFSPSLASDTSEYICLVNDRHIPEAIVDLLVQDVPDPPERPLLI 149
                               |.:.||.|.. |.|                    |||..|.|.:.:
  Rat   699 -------------------GPESSPVLVR-TDE--------------------DVPSGPPRKVEV 723

  Fly   150 S-FTSRSVNLSW----AHSQH-----------------PRNAPVTHFII------ETREGEDGIW 186
            . ..|.:|::||    .:.||                 ||..|:...::      ...|.||   
  Rat   724 EPLNSTAVHVSWKLPVPNKQHGQIRGYQVTYVRLENGEPRGQPIIQDVMLAEAQWRPEESED--- 785

  Fly   187 EQLARIYTKTNATSYQVTGLTPFTVYSFRLLAVNKLGISPPSKESYYIVTLREAPTGKP---IPT 248
                  |..|      ::||||.|.||..:.|....|....||..  :||...|..|:|   :.|
  Rat   786 ------YETT------ISGLTPETTYSITVAAYTTKGDGARSKPK--VVTTTGAVPGRPTMMVST 836

  Fly   249 TAHNTSSTSVYISWKAPPPDTILGEFLGYRITYRPRDRDPNDTKEIYIRDNTVE-SHEIQNLQTY 312
            ||.:|:    .:.|.  ||..:.||.||||:.||..|.         .|.||:: ..:.|:....
  Rat   837 TAMHTA----LLQWH--PPKELPGELLGYRLQYRRADE---------ARPNTIDFGKDDQHFTVT 886

  Fly   313 TQYKVTVQVF-----NPEGLGPETTILVMTDEGVPSK-PQNLTILDVSANSITMSWHPP--KNQN 369
            ..:|....:|     |..|.|.|....:.|.|..||. ||||.:..::.::..::|.||  ..:|
  Rat   887 GLHKGATYIFRLAAKNRAGPGEEFEKEITTPEDAPSGFPQNLRVTGLTTSTTELAWDPPVLAERN 951

  Fly   370 GAIAGYHVFHIHDNQTGVEIVKNSRNSVETLIHFELQNLRPYTDYRVIVKAFTTKNEGEPSDQIA 434
            |.|..|.|.:...|.      ::...:|...:|..|..|:|.|.|.:.|:|.|:|.         
  Rat   952 GRITNYTVVYRDINS------QHELQNVTGDVHLTLLGLKPDTTYDIKVRAHTSKG--------- 1001

  Fly   435 QRTDVGGPSAPAIVNLTCHSQE--------------SITIRWRRPYEFYNTIDFYIIKTRLAGQ- 484
                 .||.:|:|.:.|...::              |:.:.|..|..:.:.:.|.|:..   || 
  Rat  1002 -----AGPLSPSIQSQTMPMEQVFAKNFRVAAAMKTSVLLSWEVPDSYKSAVPFKILYN---GQS 1058

  Fly   485 ---DTH------RDIRIN------------------------------------ASA-------- 496
               |.|      .|::.|                                    |||        
  Rat  1059 VEVDGHSMRKLIADLQPNTEYSFVLMNRGSSAGGLQHLVSIRTAPDLLPQKPLPASAFIEDGRFS 1123

  Fly   497 -------------------------------------KELETAMILQ------------------ 506
                                                 :|||...:|:                  
  Rat  1124 LSMPQVQDPSLVRWFYIVVVPIDRVGGNLLAPRWSTPEELELDELLEAIEQGEEKQRRRRRQAER 1188

  Fly   507 ------------------------------NLTTNSYYEVKVAAATFSVINPKKIVLGKFSESRI 541
                                          .|:.:..|:..|.|:....::.|:.....:|:..:
  Rat  1189 LKPYVAAQVDELPETFTLGDKKNYRGFYNRPLSPDLSYQCFVLASLKEPMDQKRYASSPYSDEIV 1253

  Fly   542 IQLQPNCEKLQPLLRQSHNDYNLAVLVGIIFSCFGIILIIMAFFLWSRKCFH------------- 593
            :|:.|..::.:|         .:..:.|.:.:...||||::|..|:.||..|             
  Rat  1254 VQVTPAQQQEEP---------EMLWVTGPVLAVILIILIVIAILLFKRKRTHSPSSKDEQSIGLK 1309

  Fly   594 -AAYYYLDDP---------------PHHPNAPQVDWEVPVKIGDEIRAAVPVNEFAKHVASLHAD 642
             :...:..||               |..||...:....|          :|:.:.|.::..|.|:
  Rat  1310 DSLLAHSSDPVEMRRLNYQTPGSSAPSCPNISSMRDHPP----------IPITDLADNIERLKAN 1364

  Fly   643 GDIGFSREYEAIQNECISDDLPCEHSQHPENKRKNRYLNITAYDHSRV---HLHPTPGQKKNLDY 704
            ..:.||:|||:|..   ......|:|....||.||||.|:.|||||||   .:...||.    ||
  Rat  1365 DGLKFSQEYESIDP---GQQFTWENSNSEVNKPKNRYANVIAYDHSRVLLTSIDGVPGS----DY 1422

  Fly   705 INANFIDGYQKGHAFIGTQGPLPDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCDMYWPKDGVE 769
            ||||:||||:|.:|:|.||||||:|...||||:||||.|.:||:|.|.|:.|.|||.|||..|.|
  Rat  1423 INANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTE 1487

  Fly   770 TYGVIQVKLIEEEVMSTYTVRTLQIKHLKLKKKKQCNTEKLVYQYHYTNWPDHGTPDHPLPVLNF 834
            |||:|||.|::...::|||:||..:......:|::      :.|:.:..|||||.|::|.|:|.|
  Rat  1488 TYGLIQVTLVDTVELATYTMRTFALHKSGSSEKRE------LRQFQFMAWPDHGVPEYPTPILAF 1546

  Fly   835 VKKSSAANPAEAGPIVVHCSAGVGRTGTYIVLDAMLKQIQQKNIVNVFGFLRHIRAQRNFLVQTE 899
            :::..|.||.:|||:||||||||||||.:||:||||::::.:..|:::|.:..:|:|||::||||
  Rat  1547 LRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTE 1611

  Fly   900 EQYIFLHDALVEAIASGETNLMAE----QVEELKNCTP-----YLEQQYKNIIQFQPKDIHIASA 955
            :||:|:|:||:||...|.|.::|.    .:::|....|     .:|.::|.:...:.......||
  Rat  1612 DQYVFIHEALLEAAMCGHTEVLARNLYAHIQKLGQVPPGESVTAMELEFKLLANSKAHTSRFISA 1676

  Fly   956 MKQVNSIKNRGA-IFPIEGSRVHLTPKPGEDGSDYINASWLHGFRRLRDFIVTQHPMAHTIKDFW 1019
            ....|..|||.. |.|.|.:||.|.|..|.:||||||||:|.|:|:.:.:|.||.|:|.:.:|||
  Rat  1677 NLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFW 1741

  Fly  1020 QMVWDHNAQTVVLLSSLDDI---NFAQFWPDEATPIESDHYRVKFLNKTNKSDYVSRDFVIQSIQ 1081
            :|:|:||:..:|:|:.|.::   ...|:||.|.: ....::.|..:.:.|...|:.|:|.:...:
  Rat  1742 RMLWEHNSTIIVMLTKLREMGREKCHQYWPAERS-ARYQYFVVDPMAEYNMPQYILREFKVTDAR 1805

  Fly  1082 DDYELTVKMLHCPSWPEMSNPNS---IYDFIVDVHERCNDY-RNGPIVIVDRYGGAQACTFCAIS 1142
            |....|::......|||...|.:   ..|||..||:....: ::|||.:....|..:...|..:|
  Rat  1806 DGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLS 1870

  Fly  1143 SLAIEMEYCSTANVYQYAKLYHNKRPGVWTSSEDIRVIY 1181
            .:...|.|....:::|..|....:||.:..:.:..::.|
  Rat  1871 IVLERMRYEGVVDMFQTVKTLRTQRPAMVQTEDQYQLCY 1909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 28/123 (23%)
FN3 243..337 CDD:238020 28/102 (27%)
fn3 343..430 CDD:394996 25/89 (28%)
FN3 442..520 CDD:238020 25/230 (11%)
R5-PTPc-1 704..907 CDD:350397 103/202 (51%)
R5-PTP-2 989..1182 CDD:350398 56/200 (28%)
PtprfXP_038966082.1 I-set 33..124 CDD:400151
Ig strand B 50..54 CDD:409353
Ig strand C 63..67 CDD:409353
Ig strand E 86..93 CDD:409353
Ig strand F 104..109 CDD:409353
Ig strand G 117..120 CDD:409353
IgI_2_RPTP_IIa_LAR_like 136..232 CDD:409400
Ig strand A 136..138 CDD:409400
Ig strand A' 143..147 CDD:409400
Ig strand B 150..159 CDD:409400
Ig strand C 164..170 CDD:409400
Ig strand C' 172..174 CDD:409400
Ig strand D 183..187 CDD:409400
Ig strand E 196..201 CDD:409400
Ig strand F 210..217 CDD:409400
Ig strand G 220..231 CDD:409400
IgI_3_RPTP_IIa_LAR_like 241..322 CDD:409401
Ig strand A 241..243 CDD:409401
Ig strand A' 247..251 CDD:409401
Ig strand B 254..262 CDD:409401
Ig strand C 267..273 CDD:409401
Ig strand C' 275..277 CDD:409401
Ig strand D 280..284 CDD:409401
Ig strand E 289..294 CDD:409401
FN3 294..718 CDD:442628 26/123 (21%)
Ig strand F 301..308 CDD:409401
Ig strand G 312..321 CDD:409401
FN3 598..1065 CDD:442628 125/525 (24%)
PTP_DSP_cys 1352..1627 CDD:475123 136/287 (47%)
R-PTP-F-2 1629..1919 CDD:350477 79/282 (28%)
Blue background indicates that the domain is not in the aligned region.

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