DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp99A and Ptpn20

DIOPT Version :10

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_001073618.1 Gene:Ptpn20 / 306281 RGDID:1309812 Length:421 Species:Rattus norvegicus


Alignment Length:293 Identity:99/293 - (33%)
Similarity:153/293 - (52%) Gaps:32/293 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   638 SLHADGDIGFSREYEAIQNECISDDLPCEHSQHPENKRKNRYLNITAYDHSRVHLHPTPGQKKNL 702
            :|....::...||:..::.....||.  :.....:|:.||||.:|..||.:||.|      .||.
  Rat   151 ALQKKEELDIIREFLELEEMIPPDDF--KSGYELQNRDKNRYRDILPYDSTRVPL------GKNK 207

  Fly   703 DYINANFID--GYQKGHAFIGTQGPLPDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCDMYWP- 764
            |||||::|.  .:::.:.:|.||||||||.:.||:|:.|....:|.|||..:|.|..||..||| 
  Rat   208 DYINASYIRIVNHEEEYFYIATQGPLPDTIEDFWQMVLENNCNVIAMITREIEGGVIKCCSYWPV 272

  Fly   765 --KDGVETYGVIQVKLIEEEVMSTYTVRTLQIKHLKLKKKKQCNTEKLVYQYHYTNWPDHGTP-- 825
              |:.:| :....|.|...::...:.:|..||      .||.......|....:..|||||||  
  Rat   273 SLKEPLE-FKHFHVLLENFQITQYFVIRIFQI------VKKSTGKSHSVKHLQFIKWPDHGTPAS 330

  Fly   826 -DHPLPVLNFVKKSSAANPAEAGPIVVHCSAGVGRTGTYIVLDAMLKQIQQKNIVNVFGFLRHIR 889
             |..:..:.:|:||..     .||::|||||||||||.:|.:|.:...|::....|:...:..:|
  Rat   331 ADFFIKYVRYVRKSHI-----TGPLLVHCSAGVGRTGVFICVDVVFCTIEKNYSFNIMNIVTQMR 390

  Fly   890 AQRNFLVQTEEQYIFLHDALVEAIASGETNLMA 922
            .||..::||:|||.|.::.::|.:    .||:|
  Rat   391 KQRFGMIQTKEQYQFCYEIVLEVL----QNLLA 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020
FN3 243..337 CDD:238020
fn3 343..430 CDD:394996
FN3 442..520 CDD:238020
R5-PTPc-1 704..907 CDD:350397 76/210 (36%)
R5-PTP-2 989..1182 CDD:350398
Ptpn20NP_001073618.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..116
PTP_DSP_cys 209..415 CDD:475123 77/221 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.