DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp99A and Ptpn5

DIOPT Version :10

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_038965611.1 Gene:Ptpn5 / 29644 RGDID:3448 Length:613 Species:Rattus norvegicus


Alignment Length:239 Identity:91/239 - (38%)
Similarity:134/239 - (56%) Gaps:14/239 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   675 RKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFIDGYQ-KGHAFIGTQGPLPDTFDCFWRMIW 738
            |||||..|....||||.|.....:.....|||||:|.||. :...:|.||||:..|...||||:|
  Rat   372 RKNRYKTILPNPHSRVRLTSPDPEDPLSSYINANYIRGYNGEEKVYIATQGPIVSTVADFWRMVW 436

  Fly   739 EQRVAIIVMITNLVERGRRKCDMYWPKDGVETYGVIQVKLIEEEVMSTYTVRTLQIKHLKLKKKK 803
            ::|..||||||| :|....||..|||::.|...|   |::..::|:.|...|      |:|...:
  Rat   437 QERTPIIVMITN-IEEMNEKCTEYWPEEQVVHDG---VEITVQKVIHTEDYR------LRLISLR 491

  Fly   804 QCNTEKLVYQYHYTNWPDHGTPDHPLPVLNFVKKSSAANPAE---AGPIVVHCSAGVGRTGTYIV 865
            :...|:.:..|.:|:|||..|||...|:|:.|::...|...|   ..||:||||||:||||.:|.
  Rat   492 RGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPHCSPIIVHCSAGIGRTGCFIA 556

  Fly   866 LDAMLKQIQQKNIVNVFGFLRHIRAQRNFLVQTEEQYIFLHDAL 909
            .....:|::::.:|::......:|..|..::||.|||.|:|.|:
  Rat   557 TSICCQQLRREGVVDILKTTCQLRQDRGGMIQTCEQYQFVHHAM 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020
FN3 243..337 CDD:238020
fn3 343..430 CDD:394996
FN3 442..520 CDD:238020
R5-PTPc-1 704..907 CDD:350397 78/206 (38%)
R5-PTP-2 989..1182 CDD:350398
Ptpn5XP_038965611.1 PTPc-N5 346..603 CDD:350461 91/239 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.