DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp99A and Ptprd

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_036019731.1 Gene:Ptprd / 19266 MGIID:97812 Length:1966 Species:Mus musculus


Alignment Length:1544 Identity:397/1544 - (25%)
Similarity:621/1544 - (40%) Gaps:480/1544 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PCPGVN---EHSLVDTLVWKTASTTIAQFANRIPLLHSPRIQLLSDNFGLQFSPSLASDTSEYIC 120
            |...||   :|::.|:.:     |||   .|.:|              ...:|..:.:.||    
Mouse   467 PTQHVNNWMKHNVADSQI-----TTI---GNLVP--------------QKTYSVKVLAFTS---- 505

  Fly   121 LVNDRHIPEAIVDLLVQDVPDPPERPLLISF-----TSRSVNLSWAHSQHPRNAPVTHFIIETRE 180
             :.|..:...|..:....||..|     ::|     :..|:.|||.   .||:..:..:.:..|:
Mouse   506 -IGDGPLSSDIQVITQTGVPGQP-----LNFKAEPESETSILLSWT---PPRSDTIASYELVYRD 561

  Fly   181 GEDGIWEQLARIYTKTNATSYQVTGLTPFTVYSFRLLAVNKLGISPPSKESYYIVTLREAPTGKP 245
            |:.|..:::    |....|||::.||.|.::|.|||.|.:..|:...:.| ....|::..|:..|
Mouse   562 GDQGEEQRI----TIEPGTSYRLQGLKPNSLYYFRLSARSPQGLGASTAE-ISARTMQSKPSAPP 621

  Fly   246 IPTTAHNTSSTSVYISWKAPPPDTILGEFLGYRITYRPRDRDPNDTKEIYIRDNTVESHEIQNLQ 310
            ...:..:.||||:.:||:.||.:...|....|.:.|...|.:.....||....:....:.::.|:
Mouse   622 QDISCTSPSSTSILVSWQPPPVEKQNGIITEYSLKYAAVDGEDFKPHEILGIPSDTTKYLLEQLE 686

  Fly   311 TYTQYKVTVQVFNPEGLGPET-TILVMTDEGVPS-KPQNLTILDVSANSITMSWHP--PKNQNGA 371
            .:|:|::||......|.|||: ::|:.|||.||| .|:.:.:..|:|.::.:||..  |..|:|.
Mouse   687 KWTEYRITVTAHTDVGPGPESLSVLIRTDEDVPSGPPRKVEVEAVNATAVKVSWRSPVPNKQHGQ 751

  Fly   372 IAGYHVFHI---HDNQTGVEIVKN------SRNSVETLIH-FELQNLRPYTDYRVIVKAFTTKNE 426
            |.||.|.::   :....|..::|:      .....:|..| ..:..|:|.|.|.:.|.|:|||.:
Mouse   752 IRGYQVHYVKMENGEPKGQPMLKDVMLADAQWEFDDTTEHDMIISGLQPETSYSLTVTAYTTKGD 816

  Fly   427 GEPSDQIAQRTDVGGPSAPAIVNLTCHSQ-ESITIRWRRPYEFYNTIDFYIIK------------ 478
            |..|......|....|..|.:|  ..|:| .:..|:|..|.:.:..:..|.:|            
Mouse   817 GARSKPKLVSTTGAVPGKPRLV--INHTQMNTALIQWHPPVDTFGPLQGYRLKFGRKDMEPLTTL 879

  Fly   479 ---------------------TRLAG-------------------------QDTH---------- 487
                                 .||:.                         |:.|          
Mouse   880 EFSEKEDHFTATDIHKGASYVFRLSARNKVGFGEEMVKEISVPEEIPTGFPQNLHSEGTTSTSVQ 944

  Fly   488 ----------------------RDIRINASAKE-----LETAMILQNLTTNSYYEVKVAAAT--- 522
                                  |||.:.....|     .:|:|.|..|.:::.|:|||.|.|   
Mouse   945 LSWQPPVLAERNGVITKYTLLYRDINVPLLPMEHLIVPADTSMTLTGLKSDTTYDVKVRAHTSKG 1009

  Fly   523 -------------------------------------------FSVINPKKI----------VLG 534
                                                       ::...|.||          |.|
Mouse  1010 PGPYSPSVQFRTLPVDQAVFAKNFHVKAVMKTSVLLSWEIPENYNSAMPFKILYDDGKMVEEVDG 1074

  Fly   535 KFSESRIIQLQP-----------------------------------------NCE--------- 549
            :.::..|:.|:|                                         |.:         
Mouse  1075 RATQKLIVNLKPEKSYSFVLTNRGNSAGGLQHRVTAKTAPDVLRTKPAFIGKTNLDGMITVQLPD 1139

  Fly   550 ----------------------------------KLQPLLR------------------------ 556
                                              :|..||:                        
Mouse  1140 VPANENIKGYYIIIVPLKKSRGKFIKPWESPDEMELDELLKEISRKRRSIRYGREVELKPYIAAH 1204

  Fly   557 ------------------------QSHNDYNLAVL------------------------------ 567
                                    ||..:|...||                              
Mouse  1205 FDVLPTEFTLGDDKHYGGFTNKQLQSGQEYVFFVLAVMDHAESKMYATSPYSDPVVSMDLDPQPI 1269

  Fly   568 ----------VGIIFSCFGIILIIMAFFLW-------------SRKCFHAAYYYLDDPPHHPNAP 609
                      ||.:.:...||.|::|..|:             |||  .:.....:.|.|||..|
Mouse  1270 TDEEEGLIWVVGPVLAVVFIICIVIAILLYKSSKPDRKRAESESRK--SSLPNSKEVPSHHPTDP 1332

  Fly   610 ----QVDWEVPVKIGDEIRAA-------------------------------------VPVNEFA 633
                :::::.|....:.:..|                                     :|:.|.|
Mouse  1333 VELRRLNFQTPALSSNSVPYASLIGSVSSLSSQTTTQSIYDNNSLPRFARKGMASHPPIPILELA 1397

  Fly   634 KHVASLHADGDIGFSREYEAIQNECISDDLPCEHSQHPENKRKNRYLNITAYDHSRVHL---HPT 695
            .|:..|.|:.::.||:|||:|..   ......|||....||.||||.|:.|||||||.|   ...
Mouse  1398 DHIERLKANDNLKFSQEYESIDP---GQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLLSAIEGI 1459

  Fly   696 PGQKKNLDYINANFIDGYQKGHAFIGTQGPLPDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCD 760
            ||.    ||:|||:||||:|.:|:|.|||.||:||..|||||||||.|.:||:|.|.||.|.|||
Mouse  1460 PGS----DYVNANYIDGYRKQNAYIATQGSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCD 1520

  Fly   761 MYWPKDGVETYGVIQVKLIEEEVMSTYTVRTLQIKHLKLKKKKQCNTEKLVYQYHYTNWPDHGTP 825
            .|||..|.||:|::||.|::...::||.|||..:      .|...:.::.|.|:.:|.|||||.|
Mouse  1521 QYWPSRGTETHGLVQVTLLDTVELATYCVRTFAL------YKNGSSEKREVRQFQFTAWPDHGVP 1579

  Fly   826 DHPLPVLNFVKKSSAANPAEAGPIVVHCSAGVGRTGTYIVLDAMLKQIQQKNIVNVFGFLRHIRA 890
            :||.|.|.|:::....||.:|||:||||||||||||.:||:||||::|:.:..|:::|.:..:||
Mouse  1580 EHPTPFLAFLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRA 1644

  Fly   891 QRNFLVQTEEQYIFLHDALVEAIASGETNLMAE----------QVEELKNCTPYLEQQYKNIIQF 945
            |||::||||:||||:||||:||:..|.|.:.|.          |:|..:|.|. :|.::|.:...
Mouse  1645 QRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYAYIQKLTQIETGENVTG-MELEFKRLASS 1708

  Fly   946 QPKDIHIASAMKQVNSIKNRGA-IFPIEGSRVHLTPKPGEDGSDYINASWLHGFRRLRDFIVTQH 1009
            :.......||....|..|||.. |.|.|.:||.|.|..|.:||||||||:|.|:|:.:.:|.||.
Mouse  1709 KAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQG 1773

  Fly  1010 PMAHTIKDFWQMVWDHNAQTVVLLSSLDDI---NFAQFWPDEATPIESDHYRVKFLNKTNKSDYV 1071
            |:|.|.:|||:|:|:||:..||:|:.|.::   ...|:||.|.: ....::.|..:.:.|...|:
Mouse  1774 PLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERS-ARYQYFVVDPMAEYNMPQYI 1837

  Fly  1072 SRDFVIQSIQDDYELTVKMLHCPSWPEMSNPNS---IYDFIVDVHERCNDY-RNGPIVIVDRYGG 1132
            .|:|.:...:|....||:......|||...|.|   ..|||..||:....: ::|||.:....|.
Mouse  1838 LREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGV 1902

  Fly  1133 AQACTFCAISSLAIEMEYCSTANVYQYAKLYHNKRPGVWTSSEDIRVIY 1181
            .:...|..:|.:...|.|....:::|..|:...:||.:..:.:..:..|
Mouse  1903 GRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDQYQFCY 1951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 26/100 (26%)
fn3 249..331 CDD:278470 22/81 (27%)
FN3 342..437 CDD:238020 29/107 (27%)
FN3 442..520 CDD:238020 26/173 (15%)
PTPc 646..911 CDD:214550 138/267 (52%)
PTPc 676..911 CDD:238006 127/237 (54%)
PTPc 935..1186 CDD:214550 79/255 (31%)
PTPc 963..1169 CDD:238006 72/213 (34%)
PtprdXP_036019731.1 I-set 31..123 CDD:400151
Ig strand A' 39..43 CDD:409353
Ig strand B 46..55 CDD:409353
Ig strand C 61..66 CDD:409353
Ig strand C' 69..72 CDD:409353
Ig strand D 75..83 CDD:409353
Ig strand E 84..94 CDD:409353
Ig strand F 102..110 CDD:409353
Ig strand G 113..123 CDD:409353
IgI_2_RPTP_IIa_LAR_like 135..234 CDD:409400
Ig strand B 151..155 CDD:409400
Ig strand C 164..168 CDD:409400
Ig strand E 198..202 CDD:409400
Ig strand F 212..217 CDD:409400
Ig strand G 224..227 CDD:409400
IgI_3_RPTP_IIa_LAR_like 247..328 CDD:409401
Ig strand B 261..265 CDD:409401
Ig strand C 274..278 CDD:409401
Ig strand E 295..299 CDD:409401
Ig strand F 307..312 CDD:409401
Ig strand G 320..323 CDD:409401
FN3 331..420 CDD:238020
FN3 427..519 CDD:238020 15/78 (19%)
FN3 524..612 CDD:238020 26/100 (26%)
FN3 620..714 CDD:238020 25/93 (27%)
FN3 721..827 CDD:238020 27/105 (26%)
FN3 832..927 CDD:238020 12/96 (13%)
FN3 930..1021 CDD:238020 16/90 (18%)
FN3 1031..>1092 CDD:238020 8/60 (13%)
R-PTPc-D-1 1388..1671 CDD:350472 146/295 (49%)
R-PTP-D-2 1672..1963 CDD:350476 85/282 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

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