DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Ptp99A and ZK616.8

DIOPT Version :9

Sequence 1:	NP_651691.4	Gene:	Ptp99A / 43469	FlyBaseID:	FBgn0004369	Length:	1397	Species:	Drosophila melanogaster
Sequence 2:	NP_500807.3	Gene:	ZK616.8 / 191362	WormBaseID:	WBGene00022778	Length:	160	Species:	Caenorhabditis elegans

Alignment Length:	129	Identity:	27/129 - (20%)
Similarity:	45/129 - (34%)	Gaps:	44/129 - (34%)

- Green bases have known domain annotations that are detailed below.

  Fly   324 PEGLGPETTILVMTDEGVPSKPQNL--------------TILDVSANSITMS--------WHPPK 366
            |:|...:.:||:..|||..:..|.|              :.|.|.||..::.        :...|
Worm    38 PDGPSEKISILIRDDEGRATDKQALRYSHTHPTPFQRGHSDLFVMANQPSLGPLTCCEIHYDGAK 102

  Fly   367 NQNGAIAGYH---VFHIHDNQTGVEIVKNSRNSVETLIHFELQNLRPYTDYRVIVKAFTTKNEG 427
            ...|....:|   :|| |:|:......::.:.|.||                  |.|...|::|
Worm   103 EALGTPWKFHTINIFH-HENRRVYNFQRDEQQSTET------------------VSALVCKDDG 147

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ptp99A	NP_651691.4	FN3	140..236	CDD:238020
		fn3	249..331	CDD:278470	2/6 (33%)
		FN3	342..437	CDD:238020	20/111 (18%)
		FN3	442..520	CDD:238020
		PTPc	646..911	CDD:214550
		PTPc	676..911	CDD:238006
		PTPc	935..1186	CDD:214550
		PTPc	963..1169	CDD:238006
ZK616.8	NP_500807.3	PLAT	26..127	CDD:381752	20/89 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0789
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900