DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp99A and sdf-9

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_508013.2 Gene:sdf-9 / 189901 WormBaseID:WBGene00004748 Length:345 Species:Caenorhabditis elegans


Alignment Length:319 Identity:76/319 - (23%)
Similarity:130/319 - (40%) Gaps:63/319 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   672 ENKRKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFIDGYQKGHAFIGTQGPLPDTFDCFWRM 736
            |...:||.:.|.......|.|  ||.......||||:.::....|..:|.|..|..|....||:|
 Worm    30 EAVNRNRVVKIVPQHRYNVRL--TPSMLNRDGYINASLMEFSDVGQKYILTGIPSEDKVFAFWQM 92

  Fly   737 IWEQRVAIIVMITNLVERGRRKCDMYWPKDG-VETYGVIQVKLIEEEVMSTYTVR--TLQIKHLK 798
            :.|||...|:...:.||......|.|:|..| |.:||.:||:      ..:|.:.  ....::..
 Worm    93 VLEQRSPTIIQFADNVEEKLEHYDKYFPDKGDVWSYGHLQVE------RKSYAIHQGNFHTRNFI 151

  Fly   799 LKKKKQCNTEKLVYQYHYT--NWPDHGTP-DHPLPVLNFVKKSSAA----NPAEA---------- 846
            |:|..:  |.:::   |:|  .|.:..|| ......|..|.|.:.|    |||.|          
 Worm   152 LRKGNE--THRVL---HFTVFGWTETTTPIMQDFLALRKVMKDTGALNMINPASALFRSTMRRYI 211

  Fly   847 ------GPIVVHCSAGVGRTGTYIVLDAMLKQIQQK--NIVNVFGFLRHIRAQRNFLVQTEEQYI 903
                  .|| :..:.|..|.|.::|:|.:::.|..|  |:.:|...:...:..|...|.....:.
 Worm   212 HTPPSFAPI-IQSARGSSRAGAFVVIDLLIRMIDGKKTNLYSVEDLIVKCKHMRIHCVPVALHHS 275

  Fly   904 FLHDALVE---------------AIASGET-----NLMAEQVEELKNC-TPYLEQQYKN 941
            |:::|:::               .||..|:     :.|.:::|:..|. |.:|.:..:|
 Worm   276 FIYEAVLD
YLLRRNPRFQDFKEPLIAYSESCFVKWSSMDKEIEKFINTKTWFLNESSRN 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020
fn3 249..331 CDD:278470
FN3 342..437 CDD:238020
FN3 442..520 CDD:238020
PTPc 646..911 CDD:214550 67/266 (25%)
PTPc 676..911 CDD:238006 66/262 (25%)
PTPc 935..1186 CDD:214550 2/7 (29%)
PTPc 963..1169 CDD:238006
sdf-9NP_508013.2 PTPc 7..283 CDD:214550 67/266 (25%)
PTPc 34..283 CDD:304379 66/262 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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