DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp99A and F55F8.7

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_491657.2 Gene:F55F8.7 / 172228 WormBaseID:WBGene00018895 Length:491 Species:Caenorhabditis elegans


Alignment Length:383 Identity:104/383 - (27%)
Similarity:177/383 - (46%) Gaps:66/383 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   600 DDPPHHPNAPQVDWEVPVKIGDEIRAAVPVNEFAKHVASLHADGDIGFSREYEAIQNECISDDLP 664
            :.||...:.|:..|        ..:||   ....:.::.||.|...|:               :|
 Worm   155 EQPPEPGSDPRKIW--------AFKAA---KMKCQAISKLHQDKIKGY---------------MP 193

  Fly   665 --CEHSQHPENKRKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFIDGYQKGHA-FIGTQGPL 726
              |.::.:..|...|||.::...:.:||.|     :..:.|||:|:::....|..: :|.|||||
 Worm   194 PNCTYTAYEANPDLNRYADVRCIEETRVVL-----KNHDRDYIHASWMRMPGKDQSTYITTQGPL 253

  Fly   727 PDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCDMYWPK--DGVETYGVIQVKLIE--EEVMSTY 787
            |:|...||.||:::::|.::|:..|.|.|..||.:|:|:  ..|..:|..::.|.|  ||.::..
 Worm   254 PETLSDFWHMIYQEKIAYVLMLCTLFEGGVEKCALYYPEKLGEVVKFGKYEITLTECKEEAIAGT 318

  Fly   788 TVRTLQIKHLKLKKKKQCNTEKLVYQYHYTN------WPDHGTPDHPLPVLNFVKKSSAANPAEA 846
            .:.:|.:          .|||....:..|.|      |||...|:...|::...|.....||.|.
 Worm   319 ILNSLTV----------INTEDATSEPLYMNHVQVPWWPDQLAPEDARPMIELYKWVKKVNPKEK 373

  Fly   847 GPIVVHCSAGVGRTGTYIVLDAMLKQIQQKNIVNVFGFLRHIRAQRNFLVQTEEQYIFLHDALVE 911
             ||.||||||||||.|::.:|....:|.:...:.:...:|.:||.|...||:..|::||:..|:|
 Worm   374 -PICVHCSAGVGRTATFVGIDYATIRIMENPNIEMLDIVREMRAMRFQAVQSHMQFLFLYVVLME 437

  Fly   912 -AIASGETNLMAEQVEELKN-CTPYLEQQYKNI----IQFQPKDIHIASAMKQVNSIK 963
             .|..|    :.|:..::.. .|.|.:...|.:    :|.|..: .:|:..|:...||
 Worm   438 YFIGEG----VVERTGQIDTFMTQYKKHAQKKLAKRAVQNQQGE-KVATEGKEKERIK 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020
fn3 249..331 CDD:278470
FN3 342..437 CDD:238020
FN3 442..520 CDD:238020
PTPc 646..911 CDD:214550 82/277 (30%)
PTPc 676..911 CDD:238006 78/245 (32%)
PTPc 935..1186 CDD:214550 7/33 (21%)
PTPc 963..1169 CDD:238006 1/1 (100%)
F55F8.7NP_491657.2 PTPc 193..437 CDD:214550 81/259 (31%)
PTPc 206..437 CDD:238006 78/246 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.