DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp99A and egg-5

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_491316.1 Gene:egg-5 / 172007 WormBaseID:WBGene00020035 Length:753 Species:Caenorhabditis elegans


Alignment Length:755 Identity:156/755 - (20%)
Similarity:262/755 - (34%) Gaps:248/755 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 HDNQTGVEIVKNSRNSVETLIHFELQNLRPYTDYRVIVKAFTTKNEGEP------SDQIAQRTDV 439
            :..|.||..::...||..||          ...:|..||....|:....      |::.|.....
 Worm    53 YPQQKGVSCMRARFNSESTL----------SKSFRKKVKKLAQKDRRSKERLNGNSEEDAIEVPR 107

  Fly   440 GGPS---APAIVN----LTCHSQESITIRWRRPYEFYNTIDFYIIKTRLAGQDTHRDIRINA--- 494
            |.||   ||:.:.    |.|...|......|.....:.. |..:.|...      .|:|:..   
 Worm   108 GAPSTYAAPSKLRKSKALDCLVSEKPKDEGRSEDSGHGA-DIEMAKGHF------NDVRMKVFAA 165

  Fly   495 -SAKELETAMILQNLTTNSYYEVKVAA-------ATFSVINPKKIVLGKFSESRIIQLQPNCEK- 550
             :|.::|.|::::   |....|:|.|.       ..||:....||...  :|||:..:.| |.| 
 Worm   166 RTAMQVEPALVMK---TRKALEMKNAVLENHQSPGAFSLHAAYKIAAS--AESRVGSITP-CNKK 224

  Fly   551 -----LQPLLRQSHNDYNLAVLVGIIFSCFGIILIIMAFF--LWSRKCFHAAYYYLDDPPHHPNA 608
                 :..|:|.|::|  ..:...::||         :.|  .|..: :...|...|:....|..
 Worm   225 VTKEAMANLIRSSYDD--TEITQELLFS---------SKFDSKWKGR-YTDIYMRRDENGKKPKR 277

  Fly   609 P--QVDWEVPVK-----------------------------------------IGDEIRAAVPVN 630
            |  ...|.:|:|                                         |.|....||...
 Worm   278 PVNGQGWVMPLKSICEKFGINSTFFTNHRIDLKSARDQVLLMRLLSHDQTSTWISDIHPEAVKNE 342

  Fly   631 EFAKHV-----------------ASLHADGDI--------------------------------G 646
            ..|:::                 |::.||.|.                                |
 Worm   343 TLAEYLLRELDASTMQKRVQAFKANVLADRDRVRVAGQFYNNIRIGKRMFGAARKAKYLSTIIGG 407

  Fly   647 FSREYEAIQNECISDDLPCEHSQHPENKRKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFID 711
            ..|.:|.::|..  :.:|..||....|:.|.|...:...|.:|:.|....||... |:|:||.|.
 Worm   408 MERRFEILENSV--NHIPFTHSASDNNQEKCRNPRVHCRDSTRIALQFPRGQYLG-DFIHANRIS 469

  Fly   712 GYQKGHAFIGTQGPLPDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCDMYWPKD---------- 766
            |....:.||.||.|:.:|.|.||||:|::.|..|||:|:..|..|  |:.||||.          
 Worm   470 GKPLFNEFIMTQAPMKNTVDDFWRMVWQEEVPYIVMLTSRKEPER--CEYYWPKSPSDPAVTVPG 532

  Fly   767 --GVETYGVIQVKLIEEEVMSTYTVRTLQIKHLKL----KKKKQCNTEKLVYQYHYTNWPDHGTP 825
              .:|.:||.|.           .....::.||:|    ::::           |..:|  .|..
 Worm   533 GLRIENFGVYQA-----------PDPLFRVTHLRLIGPDREER-----------HVEHW--QGDV 573

  Fly   826 DH------PLPVLNFVKKSSAANPAEAGPIVVHCSAGVGRTGTYIVLD----AMLKQIQQKNIVN 880
            ::      ||.:|..::.:|.       |:|:|...||.|....:..:    ::|:....|..|.
 Worm   574 NNSSNMYSPLNILRLLRNASK-------PVVIHDHLGVSRAACLVAAEIAICSLLRGPTYKYPVQ 631

  Fly   881 VFGFLRHIRAQRNFLVQTEEQYIFLHDALVEAIASGETNLMAEQVEELKNCTPYLEQQYKNIIQF 945
              ..::.:|.:|.|.::|..||||:|            .|:|....::......|:..|:..:|.
 Worm   632 --RAVQFLRQRRPFSIETPMQYIFVH------------RLVAFFFRDVIGSAKELDVDYERWLQE 682

  Fly   946 QPKDIHIASAMKQVNSIKNRGAIFPIEGSRVHLTPKPGED 985
            :.:.:.:.....            ||.|.|: |:|:...|
 Worm   683 RSERMFLDDLAA------------PIPGYRL-LSPRADPD 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020
fn3 249..331 CDD:278470
FN3 342..437 CDD:238020 13/61 (21%)
FN3 442..520 CDD:238020 18/88 (20%)
PTPc 646..911 CDD:214550 77/290 (27%)
PTPc 676..911 CDD:238006 69/260 (27%)
PTPc 935..1186 CDD:214550 10/51 (20%)
PTPc 963..1169 CDD:238006 7/23 (30%)
egg-5NP_491316.1 PTPc 407..660 CDD:214550 78/302 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19134
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.