DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp99A and ptp-5.3

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_490769.2 Gene:ptp-5.3 / 171660 WormBaseID:WBGene00021207 Length:483 Species:Caenorhabditis elegans


Alignment Length:337 Identity:68/337 - (20%)
Similarity:130/337 - (38%) Gaps:84/337 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   608 APQVDWEVPVKIGDEIRAAVPVNEFAKHVASLHADGD--IG---------------FSREYEAIQ 655
            ||.:...||:                .|.:||....|  :|               ..:||:.:|
 Worm   146 APNLSGSVPL----------------SHKSSLTGGADKWVGEAVAKNWMDSIDTAEVKKEYDKLQ 194

  Fly   656 NECISDDLPCEHSQHPENKRKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFIDGYQKGHAFI 720
            ::.|..:..|:  ....|.:.|:..:..|.|.:.|        |...||:|.:.:|.....:..:
 Worm   195 SQKIDVEKDCK--TWKSNPKFNQSEDFPALDSNLV--------KLGKDYVNISLVDVPLGRNVHL 249

  Fly   721 GTQGPLPDTFDCFWRMIWEQRVAIIVMIT--NLVERGRRKCDMYWPKDGVETYGVI-----QVKL 778
            | |.|:.:|.:.||:.::::|:..|.::.  ..:|...:|.:.|      ..||.:     :|:.
 Worm   250 G-QAPVTNTEETFWKAVFDKRITHIDLLVGDETIEFFPKKAEDY------TNYGQMWINNRRVEY 307

  Fly   779 IEEEVMSTYTVRTLQIKHLKLKKKKQCNTEKLVYQYHYTNWPDHGTPDHPLPVLNFVKKSSAAN- 842
            :.::|   |......:.|       .|:...:......:||.   ....||.....:|::...| 
 Worm   308 VNDDV---YRFAIEVVPH-------GCSNSIICNVTVISNWK---VDTVPLKQAIAIKEALGLNY 359

  Fly   843 -----PAEAGPIVVHCSAGVGRTGTYIVLDAMLKQIQQK----NIVNVFGFLRHIRAQRNFLVQT 898
                 ||:...::| ...|.||.|.::.|...:..|..|    .|.::   ::.||:||...|.:
 Worm   360 FLLKAPADEHAMIV-SPRGAGRAGYFLALAVAVNTIDTKLAEPCIADI---VKSIRSQRPRAVDS 420

  Fly   899 EEQYIFLHDALV 910
            ..||..|:.:|:
 Worm   421 FCQYCSLYISLL 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020
fn3 249..331 CDD:278470
FN3 342..437 CDD:238020
FN3 442..520 CDD:238020
PTPc 646..911 CDD:214550 60/297 (20%)
PTPc 676..911 CDD:238006 53/252 (21%)
PTPc 935..1186 CDD:214550
PTPc 963..1169 CDD:238006
ptp-5.3NP_490769.2 PTPc 186..433 CDD:214550 59/281 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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