DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptp99A and Ptprg

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:NP_599183.2 Gene:Ptprg / 171357 RGDID:620774 Length:1442 Species:Rattus norvegicus


Alignment Length:1284 Identity:400/1284 - (31%)
Similarity:598/1284 - (46%) Gaps:285/1284 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GKNVTIPCPGVNEHSLVDTLVWKTASTTIAQFANRIPLL-----------------HSPRIQLLS 100
            |...|.||     ..:|:.:|          |...:|:.                 |...::.|.
  Rat   254 GSLTTPPC-----SEIVEWIV----------FRRPVPISYHQLEAFYSIFTTEQQDHVKSVEYLR 303

  Fly   101 DNFGLQFSPSLASDTSEYICLVNDRHIPE-AIVDLLVQDVPD----------------PPERPLL 148
            :|    |.|..|         :|||.:.: |:.|....|:.|                ||....:
  Rat   304 NN----FRPQQA---------LNDRVVSKSAVRDAWNHDLADFLDNPLGTEASKVCSSPPIHMKV 355

  Fly   149 ISFTSRSVNLSWAHSQHPRNAPVTHFII--ETREGEDGIWEQLARIYTKTNATSYQVT--GLTPF 209
            ......::.:||:..:...:.|:.:::|  ...:.||    :..:.:||.:....:.|  .::|.
  Rat   356 QPLNQTALQVSWSQPETIYHPPIMNYMISYSWTKNED----EKEKTFTKDSDKDLKATISHISPD 416

  Fly   210 TVYSFRLLAVNKLGISPPSKESYYIVTLREAPTGK----------PIPTTAHNTSSTSVYISWKA 264
            ::|.||:.||.:..:    :..:....|.:|.|.:          .:||.:..:|:....||   
  Rat   417 SLYLFRVQAVCRNDM----RSDFSQTMLFQANTTRIFQGTRIVKTGVPTASPASSADMAPIS--- 474

  Fly   265 PPPDTILGEFLGYRITYRPRDRDPNDTKEIYIRDNTVESHEIQNLQTYTQYKVTVQ-VFNPEGLG 328
                                                      ....|:|...:... |....|:|
  Rat   475 ------------------------------------------SGSSTWTSSGIPFSFVSMATGMG 497

  Fly   329 PE------TTILVMTDE----------GVPSKPQNL--TILDVSANSITMSWHPPKNQNGAIAG- 374
            |.      |...|:|..          |:.|.|..:  |.|..::.:...:..|......|:|. 
  Rat   498 PSSSGSQATVASVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTASAASKQAGRPVLATTEALASP 562

  Fly   375 ---YHVFHIHDNQTGVEIVKNSRNSVETLIHFELQNLRPYTDYRVIVKAFTTKNEGEPSDQIAQR 436
               .......|.:...|..|..::..|   ..|.:......|.....|:..|....| |||.|..
  Rat   563 GPDGDSAPTKDGEGAEEGEKEEKSESE---DGEREQEEEEKDSEKKEKSEATHTAAE-SDQTAPA 623

  Fly   437 TDVGGPSAPAIVNLTCHSQESITIRWRRPYEFYNTIDFYIIKTRLAGQDTHRDIRINASAKELET 501
            ..   ||:|   :.|.......||...|........|          |..|.|..::..   ::|
  Rat   624 PT---PSSP---HRTAQEGGHQTIPGHRQDHSAPVTD----------QPGHVDPGLDTL---VDT 669

  Fly   502 AMILQNLTTNSYYEVKVAAATFSVINPKK--------IVLG-KFSE-SRIIQLQP---------- 546
            |..:....|..:|         |..:||:        |..| :||| |:.|.:.|          
  Rat   670 ATQVPPTATEEHY---------SGSDPKRPEMPSKKPISRGDRFSEDSKFITVNPAEKNTSGMIS 725

  Fly   547 -----NCEKLQPLLRQSHNDYNLAVLVGIIFSCFGIILIIMAFFLW------------------- 587
                 ..|.:.||:          |:..:.|.|  ::|:|.....|                   
  Rat   726 RPSPGRMEWIIPLI----------VVSALTFVC--LVLLIAVLVYWRGCNKIKSKGFPRRSREVP 778

  Fly   588 ---------SRKCFHAAYYYLDDPPHHPNAPQV--DWEVP-VKIGDEIRAAVPVNEFAKHVASLH 640
                     |||||..|::|::|    .::|:|  :..:| :.|.|::. |:||.:|.||:..|:
  Rat   779 SSGERGEKGSRKCFQTAHFYVED----SSSPRVVPNESIPIIPIPDDME-AIPVKQFGKHIGELY 838

  Fly   641 ADGDIGFSREYEAIQNECISD-DLPCEHSQHPENKRKNRYLNITAYDHSRVHLHPTPGQ-KKNLD 703
            ::...|||.::|.:| .|.:| ::..|||.||:||.||||:||.|||||||.|.|.||: .|:.|
  Rat   839 SNSQHGFSGDFEEVQ-RCTADMNITAEHSNHPDNKHKNRYINILAYDHSRVKLRPLPGKDSKHSD 902

  Fly   704 YINANFIDGYQKGHAFIGTQGPLPDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCDMYWPKDGV 768
            |||||::|||.|..|:|.|||||..||:.||||||||...||:|||||||:||||||.|||.:..
  Rat   903 YINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIIMITNLVEKGRRKCDQYWPTENT 967

  Fly   769 ETYGVIQVKLIEEEVMSTYTVRTLQIKHLKLKKKKQCN-----TEKLVYQYHYTNWPDHGTPDHP 828
            |.||.|.|.|...||.:.||||...:::.|:||.::.|     .|:.|.|||||.|||.|.|::.
  Rat   968 EEYGNIIVTLKSTEVHACYTVRRFSVRNTKVKKGQKGNPKGRQNERTVIQYHYTQWPDMGVPEYA 1032

  Fly   829 LPVLNFVKKSSAANPAEAGPIVVHCSAGVGRTGTYIVLDAMLKQIQQKNIVNVFGFLRHIRAQRN 893
            ||||.||::||||...:.||::|||||||||||||||:|:||:||:.|:.|||.|||:|||.|||
  Rat  1033 LPVLTFVRRSSAARMPDMGPVLVHCSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRN 1097

  Fly   894 FLVQTEEQYIFLHDALVEAIASGETNLMAEQVEELKNC--------TPYLEQQYKNIIQFQPKDI 950
            :||||||||||:||||:|||...||.:.:.|:....|.        ...||:|:|.|.|...|.:
  Rat  1098 YLVQTEEQYIFIHDALLEAILGKETEVSSSQLHSYVNSILIPGVGGKTRLEKQFKLITQCNAKYV 1162

  Fly   951 HIASAMKQVNSIKNR-GAIFPIEGSRVHLTPKPGEDGSDYINASWLHGFRRLRDFIVTQHPMAHT 1014
            ...||.|:.|..||| .::.|.|.:||.|.|.||..|:||||||::.|:.|..:||:||||:.||
  Rat  1163 ECFSAQKECNKEKNRNSSVVPAERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHT 1227

  Fly  1015 IKDFWQMVWDHNAQTVVLL---SSLDDINFAQFWPDEATPIESDHYRVKFLNK-----TNKSDYV 1071
            .||||:|:||||||.:|:|   .||.:..|. :||.....:..:.:.|..::|     :|:...:
  Rat  1228 TKDFWRMIWDHNAQIIVMLPDNQSLAEDEFV-YWPSREESMNCEAFTVTLISKDRLCLSNEEQII 1291

  Fly  1072 SRDFVIQSIQDDYELTVKMLHCPSWPEMSNP-NSIYDFIVDVHERCNDYRNGPIVIVDRYGGAQA 1135
            ..||::::.||||.|.|:...||.||....| :|.::.|..:.|... .|:||.::.|.||...|
  Rat  1292 IHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEAL-ARDGPTIVHDEYGAVSA 1355

  Fly  1136 CTFCAISSLAIEMEYCSTANVYQYAKLYHNKRPGVWTSSEDIRVIYNIL 1184
            ...||:::|:.::|..:..:|:|.||:.:..||||:|..|..:.:|..:
  Rat  1356 GMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFVYKAM 1404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 18/115 (16%)
fn3 249..331 CDD:278470 9/88 (10%)
FN3 342..437 CDD:238020 20/100 (20%)
FN3 442..520 CDD:238020 15/77 (19%)
PTPc 646..911 CDD:214550 164/271 (61%)
PTPc 676..911 CDD:238006 150/240 (63%)
PTPc 935..1186 CDD:214550 98/260 (38%)
PTPc 963..1169 CDD:238006 81/215 (38%)
PtprgNP_599183.2 alpha_CARP_receptor_like 67..319 CDD:239396 17/92 (18%)
FN3 348..438 CDD:238020 17/97 (18%)
R-PTPc-G-1 845..1118 CDD:350505 165/273 (60%)
R-PTP-G-2 1202..1406 CDD:350508 74/205 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 321 1.000 Domainoid score I1192
eggNOG 1 0.900 - - E2759_KOG0789
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 571 1.000 Inparanoid score I1020
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133562at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45463
orthoMCL 1 0.900 - - OOG6_102521
Panther 1 1.100 - - O PTHR19134
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1476
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

Return to query results.
Submit another query.