DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp99A and ptprsa

DIOPT Version :10

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_068072483.1 Gene:ptprsa / 140820 ZFINID:ZDB-GENE-020107-3 Length:1936 Species:Danio rerio


Alignment Length:1719 Identity:405/1719 - (23%)
Similarity:651/1719 - (37%) Gaps:635/1719 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GKNVTIPCPGVNEHSLVDTLVWKTASTTIAQFANRIPL------LHSPRIQLLSDNFGLQFSPSL 111
            |.:|.|.|..|.  |.:..:.|...|..:.. .:.:|:      |:|.|                
Zfish   248 GGSVNITCVAVG--SPMPYVKWMLNSEDLTP-EDEMPVGRNVLELNSVR---------------- 293

  Fly   112 ASDTSEYICL-VNDRHIPEAIVDLLVQDVPDPPERPLLISFTSRSVNLSWAHSQHPRNAPVTHFI 175
              :::.|.|: ::...|.|.:..:.|:.:|.||..|::...|:.|:.::| .|.:|.  ||:|:|
Zfish   294 --ESANYTCVAMSSLGIIETVAQITVKSLPKPPGTPVVTETTATSITITW-DSGNPE--PVSHYI 353

  Fly   176 IETR-EGEDGIWEQLARIYTKTNATSYQVTGLTPFTVYSFRLLAVNKLGISPPSK---------- 229
            |:.| :..:..:|.:..|.|    |.|.:.||:|.|.|..|:.|.|.:|..|||:          
Zfish   354 IQYRAKSPESKFETVDSITT----TRYSIGGLSPNTDYEIRVSAFNTIGQGPPSEPVEARTGEQA 414

  Fly   230 ----------------------------------------------------------------- 229
                                                                             
Zfish   415 PASPPRNIQARIISQNTVLVRWDEPDEPNGQIKGYRVYYTMDPTLPMSMWQIHNVQDSVLTTIQS 479

  Fly   230 ----ESYYIVTL----------------------------------------------------- 237
                |:|.|..|                                                     
Zfish   480 LVTSETYTIRVLAFTSVGDGPFSDPIHVKVLQGVPGQPTNFQVGEVSDTGVELTWEPAFEKEGII 544

  Fly   238 ---------REAPTGKP--IPTTA----------------------------------------- 250
                     ::.|.||.  .||::                                         
Zfish   545 SYELHYKEGKDGPLGKKKFAPTSSFVVDGLRPNTEYFFSLAAVSSKGIGAFTNDLAQTTSQAKPS 609

  Fly   251 --------HNTSSTSVYISWKAPPPDTILGEFLGYRITYRPRDRDPNDTKEIYIRDNTVESHEIQ 307
                    .::|||.:.:||:.||.::..||..||.:.|.........:.| ::...|.:...:|
Zfish   610 APPQDIKCSSSSSTVLMVSWRPPPAESQNGELAGYIVRYAVVGAGAEVSTE-HVEAPTSDQILLQ 673

  Fly   308 NLQTYTQYKVTVQVFNPEGLGPET-TILVMTDEGVPSKPQNLTILDV-SANSITMSWHP--PKNQ 368
            .|:.:|.|:|||......|.|||: .:|..|||.||..|.....::| ::.:|.:.|..  |..|
Zfish   674 RLEKWTMYRVTVAASTSVGSGPESEPLLCRTDEDVPGAPPRRVEVEVLNSTAIKVMWRSLLPGKQ 738

  Fly   369 NGAIAGYHVFHI---HDNQTGVEIVK-----NSRNSVETLIHFE--LQNLRPYTDYRVIVKAFTT 423
            :|.|.||.|.::   :....|:.::|     :::..::....:|  :..|:|.|.|.:.|.|:||
Zfish   739 HGQIRGYQVHYVRVENGESRGLPLIKDVMLADAQWEMDDTAEYEMVIGGLQPDTTYSITVAAYTT 803

  Fly   424 KNEGEPSDQIAQRTDVGGPSAPAIVNLTCHSQESITIRWRRP--------YEFYN---------- 470
            |.:|..|......|. |....|..:::..:|:.:..|||:.|        .:.|.          
Zfish   804 KGDGARSKPKLVLTK-GAVPGPPFLSVNQNSESTAIIRWQPPDYVAPGLEVQGYRLQFGRKDVNP 867

  Fly   471 --TIDF-----------------YIIKTRLA-----GQDTHRDIRIN------------------ 493
              |::|                 ||.|....     |::..:::|:.                  
Zfish   868 LATLEFGPQELEYSISNIHRGATYIFKVSAKSKSGFGEEATQELRVPEEVPRGYPQITEGSNITC 932

  Fly   494 --------------------------------ASAKEL-----ETAMILQNLTTNSYYEVKVAAA 521
                                            :..|||     |.:.||.:|..|:.|:||:.|.
Zfish   933 CSVQFSWLPPVLAERNGAITEYTLSYQEAGTISGPKELRLPADENSYILNSLRPNAVYDVKIRAH 997

  Fly   522 T-------------------------FSV--INPKKIVLG-KFSESR------------------ 540
            |                         |:|  :....::|. ||.:||                  
Zfish   998 TSVGPGPYSPPIQYRTVAYEADVPRNFTVKLVTKTTVLLSWKFYDSRFPYKCTIEYHRQKSDIDA 1062

  Fly   541 ------IIQLQPN--------CE---------KL-----------QP---LLRQSHN-------- 560
                  |..|:||        |:         ||           :|   |.|:|.:        
Zfish  1063 RMTKTLITNLRPNTTYEFRISCQDSSDGGPKHKLVARTAPHIQIRKPELDLKRESESTLTIVFPP 1127

  Fly   561 ----------------------------------------------------------------- 560
                                                                             
Zfish  1128 LETKDLIKAIYVVVVPLKKGKGPMRHIKSPDELDLEELLGERRLGLHHSGTTRQLKQVDGKRPYI 1192

  Fly   561 ---------------------------------DYNLAVL------------------------- 567
                                             :|.|.:|                         
Zfish  1193 AASFKPSSMPPSFTLGNQMMYGSFENRALDRGQEYVLFILAELNTTGVKAFVSSPYTDPIMAPDL 1257

  Fly   568 ---------------VGIIFSCFGIILIIMAFFLWSR---------------KCFHAAYYYLDDP 602
                           ||.:.:...||.|::|..|:..               ||.   ....|..
Zfish  1258 DPQPLESGGDGLIWVVGPVLAVVFIICIVIAILLYKNSKPDSSKRKESEPRTKCL---LNNADIT 1319

  Fly   603 PHHPNAP----QVDWEVPVK-IGDEIRAA------------VPVNEFAKHVASLHADGDIGFSRE 650
            ||||..|    :::::.|.. :...:..|            :|::|.|:|...|.|:.::..|:|
Zfish  1320 PHHPTDPVEMRRINFQTPDSGLSSPVSEAGFDYESMMNHPPIPISELAEHTELLKANDNLKLSQE 1384

  Fly   651 YEAIQNECISDDLPCEHSQHPENKRKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFIDGYQK 715
            ||:|..   ......|||....||.||||.|:.|||||||.|.|..|...: ||||:|:||||:|
Zfish  1385 YESIDP---GQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILAPIEGITGS-DYINSNYIDGYRK 1445

  Fly   716 GHAFIGTQGPLPDTFDCFWRMIWEQRVAIIVMITNLVERGRRKCDMYWPKDGVETYGVIQVKLIE 780
            .:|:|.||||||:||..||||:||||.|.:||:|.|.|:.|.|||.|||..|.||||:|||.|::
Zfish  1446 QNAYIATQGPLPETFGDFWRMVWEQRAATVVMMTRLEEKSRIKCDQYWPSRGTETYGMIQVTLLD 1510

  Fly   781 EEVMSTYTVRTLQIKHLKLKKKKQCNTEKLVYQYHYTNWPDHGTPDHPLPVLNFVKKSSAANPAE 845
            ...::|:.|||..:      .|...:.::.|.|:.:|.|||||.|::|.|.|.|:::....||.:
Zfish  1511 TIELATFCVRTFSL------HKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNPPD 1569

  Fly   846 AGPIVVHCSAGVGRTGTYIVLDAMLKQIQQKNIVNVFGFLRHIRAQRNFLVQTEEQYIFLHDALV 910
            ||||:.||||||||||.:||:||||::|:.:..|:::|.:..:|:|||::||||:||.|:||||:
Zfish  1570 AGPIIAHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRSQRNYMVQTEDQYSFIHDALL 1634

  Fly   911 EAIASGETNLMAE----------QVEELKNCTPYLEQQYKNIIQFQPKDIHIASAMKQVNSIKNR 965
            ||:|.|.|.:.|.          |||..::.:. :|.::|.:...:.......||....|..|||
Zfish  1635 EAVACGNTEVAARSLFSYIQKLAQVEAGEHVSG-MELEFKRLANSKAHTSRFISANLPCNKFKNR 1698

  Fly   966 GA-IFPIEGSRVHLTPKPGEDGSDYINASWLHGFRRLRDFIVTQHPMAHTIKDFWQMVWDHNAQT 1029
            .. |.|.|.:||.|.|..|.:||||||:|::.|:|:.:.:|.||.|:|.|.:|||:|:|::|:..
Zfish  1699 LVNIMPYETTRVCLQPIRGLEGSDYINSSFIDGYRQQKAYIATQGPLAETTEDFWRMLWENNSTI 1763

  Fly  1030 VVLLSSLDDI---NFAQFWPDEATPIESDHYRVKFLNKTNKSDYVSRDFVIQSIQDDYELTVKML 1091
            ||:|:.|.::   ...|:||.|.: ....::.|..:.:.|...|:.|:|.:...:|....||:..
Zfish  1764 VVMLTKLREMGREKCHQYWPAERS-ARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQF 1827

  Fly  1092 HCPSWPEMSNPNS---IYDFIVDVHERCNDY-RNGPIVIVDRYGGAQACTFCAISSLAIEMEYCS 1152
            ....|||...|.|   ..|||..||:....: ::|||.:....|..:...|..:|.:...|.|..
Zfish  1828 QFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEG 1892

  Fly  1153 TANVYQYAKLYHNKRPGVWTSSEDIRVIY 1181
            ..:::|..|:...:||.:..:.::.:..|
Zfish  1893 VVDIFQTVKMLRTQRPAMVQTEDEYQFCY 1921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 35/175 (20%)
FN3 243..337 CDD:238020 30/145 (21%)
fn3 343..430 CDD:394996 24/99 (24%)
FN3 442..520 CDD:238020 25/174 (14%)
R5-PTPc-1 704..907 CDD:350397 103/202 (51%)
R5-PTP-2 989..1182 CDD:350398 57/200 (29%)
ptprsaXP_068072483.1 I-set 31..122 CDD:400151
Ig strand B 48..52 CDD:409353
Ig strand C 61..65 CDD:409353
Ig strand E 84..91 CDD:409353
Ig strand F 102..107 CDD:409353
Ig strand G 115..118 CDD:409353
IgI_2_RPTP_IIa_LAR_like 135..224 CDD:409400
Ig strand A' 141..145 CDD:409400
Ig strand B 148..157 CDD:409400
Ig strand C 162..168 CDD:409400
Ig strand C' 170..172 CDD:409400
Ig strand D 181..185 CDD:409400
Ig strand E 188..193 CDD:409400
Ig strand F 202..209 CDD:409400
Ig strand G 212..223 CDD:409400
IgI_3_RPTP_IIa_LAR_like 237..318 CDD:409401 16/90 (18%)
Ig strand A 237..239 CDD:409401
Ig strand A' 243..247 CDD:409401
Ig strand B 250..258 CDD:409401 3/7 (43%)
Ig strand C 263..269 CDD:409401 1/5 (20%)
Ig strand C' 271..273 CDD:409401 1/1 (100%)
Ig strand D 276..280 CDD:409401 0/4 (0%)
Ig strand E 285..290 CDD:409401 0/4 (0%)
Ig strand F 297..304 CDD:409401 2/6 (33%)
FN3 307..837 CDD:442628 104/538 (19%)
Ig strand G 308..317 CDD:409401 2/8 (25%)
FN3 792..>1088 CDD:442628 50/296 (17%)
fn3 922..1006 CDD:394996 13/83 (16%)
R-PTPc-S-1 1358..1639 CDD:350473 141/290 (49%)
R-PTP-S-2 1641..1930 CDD:350475 81/283 (29%)
Blue background indicates that the domain is not in the aligned region.

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