DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp99A and igfn1.3

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_005168832.1 Gene:igfn1.3 / 100331959 ZFINID:ZDB-GENE-131122-44 Length:1355 Species:Danio rerio


Alignment Length:759 Identity:148/759 - (19%)
Similarity:252/759 - (33%) Gaps:219/759 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 PGVNEHSLV---DTLVWKTA--STTIAQFANRIPLLHSPRIQ-------LLSDNFGLQFSPSLAS 113
            |.:|...|.   :.::.|..  :|...:|..|.|:    :||       :|.||.......|:.|
Zfish   653 PRINLEDLAKFSEPVIIKVGQNATFKLEFVGREPM----KIQWYQEGEEMLEDNHIKIERSSIHS 713

  Fly   114 ----------DTSEY-ICLVNDRHIPEAIVDLLVQDVPDPPERPL-LISFTSRSVNLSWAHSQHP 166
                      |:.|. :.|.|:....||...|:|.|.|..|..|: :|..:|..|...|...:..
Zfish   714 RLLLVKCQRKDSGEIKLKLKNEFGTIEARSKLIVIDKPTNPMGPVDVIEASSSCVEFKWRPPKDD 778

  Fly   167 RNAPVTHFIIETREGEDGIWEQLARIYTKTNATSYQVTGLTPFTVYSFRLLAVNKLGISPPSKES 231
            ..:|:.::.:|..:.....|.::..|   .....|:...:.....|.:|:.|:...|.|...:.|
Zfish   779 GGSPIINYYLERNQIGRNTWMKIGNI---PGEPHYKDNDVDHGRKYCYRIRALTAEGTSDVYETS 840

  Fly   232 YYIVTLREAPTGKPIPTTAHNTSSTSVYISWKAPPPDTILGEFLGYRITYRPR----------DR 286
            ......:..| |:|......:.....:.::| .||.:|.....:||.:..|.|          ..
Zfish   841 DIQAGTKAYP-GQPSTPKVVSAFKNCITLAW-TPPTNTGGTNIVGYNMEKRKRGSNLWGQVNPPE 903

  Fly   287 DPNDTKEIYIRDNTVESHEIQNLQTYTQYKVTVQVFNPEGLG----PETTILVMTDEGVPSKPQN 347
            :|...|:..::| .||..|         |:..|...|..|.|    |...::....:..|.|..:
Zfish   904 EPIKGKQYDVKD-VVEGME---------YEFRVSAINFSGAGEPSAPSEFVIARDPKKPPGKVID 958

  Fly   348 LTILDVSANSITMSWHPPKNQNGA---IAGYHVFHIHDNQTGVEIVKNSRNSVETLI--HFELQN 407
            |.:.|.:.:|:::||..||.:.|.   ..||.|     .....|.:...|.:...||  .:.:..
Zfish   959 LKVTDSTYSSLSLSWTKPKEEKGVQDEAKGYFV-----ELRPAESIDWGRCNSNPLITASYTILG 1018

  Fly   408 LRPYTDYRVIVKAFTTKNEGEPSDQIAQRTDVGGPSAPAIVNLTCHSQESITIRWRRPYEFYNTI 472
            |:....|.|.|.|.....:|||.|                                        :
Zfish  1019 LKSMAMYWVRVVATNEGGDGEPKD----------------------------------------L 1043

  Fly   473 DFYIIKTRLAGQDTHRDIRINASAKELETAMILQ---NLTTNSYYEVKVAAATFSVINPKKIVLG 534
            |.|||.       ....:|.|.:.:::::.|:::   :...|..:|   |:.|.::|..|    .
Zfish  1044 DNYIIA-------MPPPVRPNFTNRKMKSFMVVRAENSARVNINFE---ASPTPTIIWLK----D 1094

  Fly   535 KFSESRIIQLQPNCEKLQPLL-----RQSHNDYNLAV--LVGIIFSCFGIILIIMAFFLWSRKCF 592
            ....|:.:.:. |.:.:..||     |.....|::.|  :||                   ::.|
Zfish  1095 GMPVSKRVNIS-NADGMSQLLIASAERSDSGIYSITVKNMVG-------------------QETF 1139

  Fly   593 HAAYYYLDDP-PHHP-----NAP---QVDWEVPVKIGDEIR------------------------ 624
            .......||| |..|     |.|   .|.||   ...||.|                        
Zfish  1140 SVEIRVTDDPKPPGPVELEENVPGTLTVSWE---PSSDEKRDNHLHYMVMKRDSVKRTWQTVADR 1201

  Fly   625 ------AAVPVNEFAKHVASLHADGDIGFSREYEAIQNECIS----------DDLPCEHSQHPEN 673
                  .||.:....::...::|..|||.|...|:::...:.          ...||.....|  
Zfish  1202 LFNNNFTAVNITPGREYKFRVYAKNDIGLSEPSESLKWGVVKKREKFILNLPPSKPCNFDSAP-- 1264

  Fly   674 KRKNRYLNITAYDHSRVHLHPTPGQKKNLDYINANFIDGYQKGH 717
                   |.|.    .:.:|.||  :|...|::. .:.|..|.|
Zfish  1265 -------NFTV----PLKMHTTP--EKYECYMSC-AVKGNPKPH 1294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 18/96 (19%)
fn3 249..331 CDD:278470 20/95 (21%)
FN3 342..437 CDD:238020 26/99 (26%)
FN3 442..520 CDD:238020 9/80 (11%)
PTPc 646..911 CDD:214550 16/82 (20%)
PTPc 676..911 CDD:238006 10/42 (24%)
PTPc 935..1186 CDD:214550
PTPc 963..1169 CDD:238006
igfn1.3XP_005168832.1 I-set 44..135 CDD:254352
I-set 326..410 CDD:333254
I-set 566..638 CDD:333254
I-set 662..747 CDD:333254 19/88 (22%)
FN3 751..834 CDD:214495 16/85 (19%)
FN3 850..944 CDD:238020 23/105 (22%)
FN3 953..1040 CDD:238020 23/91 (25%)
Ig 1076..1145 CDD:325142 16/95 (17%)
FN3 1149..1236 CDD:238020 18/89 (20%)
I-set 1264..1353 CDD:254352 11/47 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0613
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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