DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptp99A and igfn1.4

DIOPT Version :9

Sequence 1:NP_651691.4 Gene:Ptp99A / 43469 FlyBaseID:FBgn0004369 Length:1397 Species:Drosophila melanogaster
Sequence 2:XP_021333034.1 Gene:igfn1.4 / 100331815 ZFINID:ZDB-GENE-131125-85 Length:1189 Species:Danio rerio


Alignment Length:455 Identity:109/455 - (23%)
Similarity:179/455 - (39%) Gaps:91/455 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 STTIAQFANRIPLLHSPRIQLL--SDNFGLQFSPSLASDTSE-YICLVNDRHIPEAIVDLLVQDV 139
            |..|..|.|...||....::::  |::..||....|.|||.: .|.|.|.....||:..|.|||.
Zfish   622 SLEIKWFKNGSELLDGGSVKVVKESNHSRLQIKDCLRSDTGQIQIRLKNPFGSIEALSSLTVQDK 686

  Fly   140 PDPPERPLLISFTSRSV-NLSWAHSQHPRNAPVTHFIIETREGEDGIWEQLARIYTKTNATSYQV 203
            |.||:.|:.::.|:.|| .|.|...:....:.||::|||..:.....|:::..|  ..|..:::.
Zfish   687 PGPPQGPVEVNETTSSVLELKWNPPKDEGGSAVTNYIIEQLQVGQNTWQKVGDI--PANHLNFRD 749

  Fly   204 TGLTPFTVYSFRLLAVNKLGISPPSKESYYIVTLREAPTGKPIPTTAHNTSSTSVYISWKAPPPD 268
            ..::....|.:|:.|.|..||| .:.|:..|:.......|.|......:.....:.:||..|..|
Zfish   750 RSVSLGKRYIYRIYAENPEGIS-EALETEKIMAGSLMFPGPPTQPKVVSAFKNCINLSWTPPEKD 813

  Fly   269 TILG--EFLGYRITYRPRDRDPNDTKEIYIRDNTVE------SHEIQNLQTYTQYKVTVQVFNPE 325
               |  :.|||:|..|.:|.:.      ::..|:|:      .:.::::...::|:..|...|..
Zfish   814 ---GGNKILGYQIEKRKKDTNQ------WVTLNSVKDPIKGLKYGVKDVSEGSEYEFRVIAINSS 869

  Fly   326 GLGPETTILVMTDEGVPS------KPQNLTILDVSANSI------------TMSWHPPKNQNGAI 372
            |.|..:|...|.....|:      .|::..::. |.|||            .:.|    .:||..
Zfish   870 GAGEPSTPSEMVCAKNPNMKPHFKDPEDFMVVR-SGNSIRIKINYEAAPQPDIKW----LKNGEP 929

  Fly   373 AGYHVFHIHDNQTGVEIVKNSRNSVETLIHFELQNLRPYTD---YRVIVKAFTTKNEGEPSDQIA 434
            .......|||:.|...||.:|:                |:|   |.::.|    .:.|:.|..|.
Zfish   930 VSPWNKIIHDDGTCTLIVPSSK----------------YSDSGVYTIVAK----NSSGQASFDIE 974

  Fly   435 QR-TDVGGPSAPAIVNLTCHSQESITIRWRRPYEFYNTIDFYIIKTRLAGQDTHRDIRINASAKE 498
            .| ||  .|..|..|.|.......:.|||                  |...|..||.|::...:|
Zfish   975 VRVTD--EPRPPGPVELEQLVFGKVIIRW------------------LPSPDHDRDDRLHYMVEE 1019

  Fly   499  498
            Zfish  1020  1019

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ptp99ANP_651691.4 FN3 140..236 CDD:238020 26/96 (27%)
fn3 249..331 CDD:278470 18/89 (20%)
FN3 342..437 CDD:238020 24/116 (21%)
FN3 442..520 CDD:238020 13/57 (23%)
PTPc 646..911 CDD:214550
PTPc 676..911 CDD:238006
PTPc 935..1186 CDD:214550
PTPc 963..1169 CDD:238006
igfn1.4XP_021333034.1 I-set 16..107 CDD:254352
I-set 281..366 CDD:333254
IG_like 512..575 CDD:214653
I-set 589..683 CDD:333254 19/60 (32%)
FN3 687..779 CDD:238020 25/94 (27%)
FN3 787..879 CDD:238020 21/100 (21%)
I-set 899..977 CDD:254352 21/102 (21%)
FN3 981..1067 CDD:238020 13/57 (23%)
I-set 1093..1182 CDD:254352
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0613
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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