DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stg and cdc25b

DIOPT Version :9

Sequence 1:NP_001263066.1 Gene:stg / 43466 FlyBaseID:FBgn0003525 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001108567.1 Gene:cdc25b / 57925 ZFINID:ZDB-GENE-000330-5 Length:563 Species:Danio rerio


Alignment Length:462 Identity:156/462 - (33%)
Similarity:224/462 - (48%) Gaps:77/462 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TSSSSSINKMSGSRRARRSLELMSMDQEELSFYDDDVVPQDQQRSASPEL-MGLLSPEGSPQRFQ 85
            |.|..|.||             .:|.:|...|          ::.:.|.| ....|..||...|.
Zfish   167 THSHDSANK-------------ENMAEENFEF----------KKPSMPALRCRTRSTGGSKDAFA 208

  Fly    86 IVRQPKILPAMGVS------SDHTPARSFRIFNSLSSTCSMESSMDDEYME-LFEMESQSQQTAL 143
            .  :|...||:.:|      .|.....|..|....|.:|..:...||.::| |.::|:.|:    
Zfish   209 C--RPNSAPALMLSPPPTNQPDSPNEISPFILRRPSLSCLQDDDDDDGFLEGLDDVENDSE---- 267

  Fly   144 GFPSGLNSLISGQI--KEQPAAKSPAGLSMRRPSVRRCLSMTESNTNSTTTPPPKTPETARDCFK 206
             .|.|::||::..:  |:.|...||         |.||      ........|.......|...|
Zfish   268 -VPLGMDSLLTAPLVAKQIPETDSP---------VIRC------RPRGLFRSPSMPCAVGRIPLK 316

  Fly   207 RPEPPASANCSPIQSKRHRCAAVEKENCPAPSPLSQVTISHPPPLRKCMSLNDAEIMSALARSEN 271
            |||.|...| :|::.||.|..|..:     .|...|..:.|  .:::..|.|.::|    .|..:
Zfish   317 RPERPQDEN-TPVRVKRRRSLAGTQ-----VSTTEQEDVVH--QVQRSKSFNHSQI----ERMLD 369

  Fly   272 RNEPELIGDFSKAYALPLMEGRHRDLKSISSETVARLLKGEFSDKVASYRIIDCRYPYEFEGGHI 336
            .:...:||||:||.|||.::|:|::||.|:.|.:.:.:.|:|.|.|....:||||||||:|||||
Zfish   370 TDPSNVIGDFTKAPALPTVQGKHQELKYITPEIMVKAMSGQFQDLVERLFVIDCRYPYEYEGGHI 434

  Fly   337 EGAKNLYTTEQILDEFLTVQQTELQQQQNAESGHKRNIIIFHCEFSSERGPKMSRFLRNLDRERN 401
            :||.||:..:||.|.|       |:.....:...||.::||||||||||||:|.|::|  :|:|.
Zfish   435 KGALNLHQEDQIEDYF-------LRSPILPDCPKKRVLLIFHCEFSSERGPRMCRYVR--ERDRF 490

  Fly   402 TNAYPALHYPEIYLLHNGYKEFFESHVELCEPHAYRTMLDPAYNEAYRHFRAKSKSWNGD-GLGG 465
            .|.||.|||||:|:|..||||||:.|..:|||..||.||...:.|..|.||.||::|.|: ....
Zfish   491 VNEYPNLHYPELYILKGGYKEFFQIHKAICEPQMYRPMLHEEFKEDLRKFRLKSRTWAGERSKRD 555

  Fly   466 ATGRLKK 472
            ...||||
Zfish   556 MYSRLKK 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stgNP_001263066.1 Cdc25 297..425 CDD:238788 64/127 (50%)
cdc25bNP_001108567.1 M-inducer_phosp 104..366 CDD:284119 59/255 (23%)
Cdc25 395..514 CDD:238788 64/127 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586492
Domainoid 1 1.000 116 1.000 Domainoid score I5911
eggNOG 1 0.900 - - E1_COG5105
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 210 1.000 Inparanoid score I3648
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1423329at2759
OrthoFinder 1 1.000 - - FOG0000931
OrthoInspector 1 1.000 - - otm25431
orthoMCL 1 0.900 - - OOG6_101194
Panther 1 1.100 - - LDO PTHR10828
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R583
SonicParanoid 1 1.000 - - X695
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.790

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