DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stg and cdc-25.3

DIOPT Version :10

Sequence 1:NP_524547.1 Gene:stg / 43466 FlyBaseID:FBgn0003525 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_498972.1 Gene:cdc-25.3 / 176260 WormBaseID:WBGene00000388 Length:316 Species:Caenorhabditis elegans


Alignment Length:286 Identity:91/286 - (31%)
Similarity:134/286 - (46%) Gaps:68/286 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 SANCSPIQSKRHRCAAVEKENCPAPSPLSQVTISHPPPLRKCM---------SLNDAEI-----M 263
            |:...|.|:::|            .|.:|.::.|.||..::.:         |.|.:||     :
 Worm    28 SSKLFPRQNRQH------------SSAISHISNSSPPTRKRSIDGGYTSGTDSANTSEIVIKKRL 80

  Fly   264 SALARSENRNEPE-----LIGDFSKAYALPLMEGRHRDLKSISSETVARLLKG----EFSDKVAS 319
            :...:|.:.:|.|     |..|:......|.....:   :.|:|||:..:::.    ||..|   
 Worm    81 TFSKKSHSTSEIETWNAHLQVDYHLETVTPSCSTVY---QKITSETLIEIMQKLSQIEFMQK--- 139

  Fly   320 YRIIDCRYPYEFEGGHIEGAKNLYTTEQILDEFLTVQQTELQQQQNAESGHKRN-IIIFHCEFSS 383
            |.:|||||.||:.||||:||::|:..|...|.|.           |.:...|.| |.||:||:|.
 Worm   140 YILIDCRYDYEYNGGHIKGAQSLFNPETAADFFF-----------NKDGSKKINRIPIFYCEYSQ 193

  Fly   384 ERGPKMSRFLRNLDRERNTNAYPALHYPEIYLLHNGYKEFF--------ESHVELCEPHAYRTML 440
            :|||.|:..||.:||:.|:|.||...|.|||||..|||.|:        |..|:||||..|..|.
 Worm   194 KRGPTMANNLREVDRKLNSNIYPRCDYEEIYLLEGGYKNFYAFTRGLEKEQRVQLCEPDNYVIMF 258

  Fly   441 DPAYN-EAYRH-FRAKS-----KSWN 459
            |..|. |..:| |..|:     |.|:
 Worm   259 DDRYKAELRKHQFHKKNVSKPMKKWS 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stgNP_524547.1 Cdc25 297..425 CDD:238788 56/140 (40%)
cdc-25.3NP_498972.1 Cdc25 116..235 CDD:238788 56/135 (41%)

Return to query results.
Submit another query.