DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11951 and Rnpep

DIOPT Version :10

Sequence 1:NP_001350853.2 Gene:CG11951 / 43463 FlyBaseID:FBgn0039656 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_112359.2 Gene:Rnpep / 81761 RGDID:621137 Length:650 Species:Rattus norvegicus


Alignment Length:371 Identity:93/371 - (25%)
Similarity:154/371 - (41%) Gaps:84/371 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 TQFEPAAARLAFPCFDEPGYKASFAITLGYHKKYTGLSNMPVNETR-PHESIPDYVWTSFEESLP 223
            ||.:....|..|||||.|..|.:::..:.....:|.:.:....|.| |::..       |:.:.|
  Rat   168 TQGQAVLNRAFFPCFDTPAVKCTYSALVEVPDGFTAVMSASTWERRGPNKFF-------FQMNQP 225

  Fly   224 MSTYLVAYSLNDFSHKPSTLPNGTLFRTWARPNAIDQC---------DYAAE----LGPKVLKYY 275
            :.:||:|.::.|.    ::...|...|.||.|..|:..         ::.|.    .||.|...|
  Rat   226 IPSYLIALAIGDL----ASAEVGPRSRVWAEPCLIEAAKEEYNGVIEEFLATGEKLFGPYVWGRY 286

  Fly   276 EELFGIKFPLPKVDQIAVPDFSAGAMENWGLVTFAESTLLYSPEYSSQEAKQETANIVAHELAHQ 340
            :.||     :|       |.|..|.||| ..:||....||        ...:..|:::.||::|.
  Rat   287 DLLF-----MP-------PSFPFGGMEN-PCLTFVTPCLL--------AGDRSLADVIIHEISHS 330

  Fly   341 WFGNLVTMKWWTDLWLNEGFATY-----------VASLCVEDIHPQWRTLQLESMSNLLTIFRKD 394
            |||||||...|.:.||||||..|           .|..|:|  ....|.|..:.|         |
  Rat   331 WFGNLVTNANWGEFWLNEGFTMYAQRRISTILFGAAYTCLE--AATGRALLRQHM---------D 384

  Fly   395 SLESSHPISR---PIEMTSQISESFDEISYQKGSSVIR-MMHLFLGEEAFRTGLKSYLEKYTYKN 455
            .....:|:::   .||......::::|..|:||...:. :.||...:|.|...||:|::::.:::
  Rat   385 VSGEENPLNKLRVKIEPGVDPDDTYNETPYEKGYCFVSYLAHLVGDQEQFDKFLKAYVDEFKFQS 449

  Fly   456 AEQDNLWESLTQ---AAHKTG--SLPK-DYNIKTIMDSWTLQTGYP 495
            ...::..|...:   ...|.|  |:|. ::|      .|....|:|
  Rat   450 ILAEDFLEFYLEYFPELKKKGVDSIPGFEFN------RWLNTPGWP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11951NP_001350853.2 M1_APN-Q_like 35..490 CDD:341064 91/364 (25%)
ERAP1_C 574..902 CDD:463368
RnpepNP_112359.2 M1_LTA4H 24..484 CDD:341062 91/364 (25%)
Leuk-A4-hydro_C 530..645 CDD:462686
Blue background indicates that the domain is not in the aligned region.

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