DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11951 and LTA4H

DIOPT Version :10

Sequence 1:NP_001350853.2 Gene:CG11951 / 43463 FlyBaseID:FBgn0039656 Length:842 Species:Drosophila melanogaster
Sequence 2:NP_000886.1 Gene:LTA4H / 4048 HGNCID:6710 Length:611 Species:Homo sapiens


Alignment Length:552 Identity:124/552 - (22%)
Similarity:219/552 - (39%) Gaps:108/552 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GTVKIQIEVLQ-NTHNITLHSKDLTIDDTEITLSQIGGEETTENCITSTAVNPTHDFYILNTCKE 117
            ||..:.::..: |..::.|.:|||||:..     .|.|:|..               |.|.. ::
Human    37 GTAALTVQSQEDNLRSLVLDTKDLTIEKV-----VINGQEVK---------------YALGE-RQ 80

  Fly   118 LLAGQFYELSLPFSAKLQDQLAGYYRSSYVNTVANET-------RWIS------------VTQFE 163
            ...|...|:|||.:.....::        |..::.||       :|::            .:|.:
Human    81 SYKGSPMEISLPIALSKNQEI--------VIEISFETSPKSSALQWLTPEQTSGKEHPYLFSQCQ 137

  Fly   164 PAAARLAFPCFDEPGYKASFAITLGYHKKYTGLSNMPVNETRPHESIPDYVWTSFEESLPMSTYL 228
            ....|...||.|.|..|.::...:...|:...|.:...:...|....|......|.:.:|:..||
Human   138 AIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYL 202

  Fly   229 VAYSLNDFSHK---PSTLPNGTLFRTWARPNAIDQCDYAAELGPKVLKYYEELFGIKFPLPKVDQ 290
            :|..:.....:   |.||       .|:....:::..|.......:||..|:|.| .:...:.|.
Human   203 IALVVGALESRQIGPRTL-------VWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDL 259

  Fly   291 IAV-PDFSAGAMENWGLVTFAESTLLYSPEYSSQEAKQETANIVAHELAHQWFGNLVTMKWWTDL 354
            :.: |.|..|.||| ..:||...|||        ...:..:|::|||::|.|.|||||.|.|...
Human   260 LVLPPSFPYGGMEN-PCLTFVTPTLL--------AGDKSLSNVIAHEISHSWTGNLVTNKTWDHF 315

  Fly   355 WLNEGFATYV-ASLCVEDIHPQWRTLQL----ESMSNLLTIFRKDSLESSHPISRPIEMTSQISE 414
            |||||...|: ..:|......::|....    ..:.|.:..|.:     :||.::.:...:.|..
Human   316 WLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGE-----THPFTKLVVDLTDIDP 375

  Fly   415 --SFDEISYQKGSSVIRMMHLFL-GEEAFRTGLKSYLEKYTYKNAEQDNLWESLTQAAHKTGSLP 476
              ::..:.|:||.:::..:...| |.|.|...||:|:||::||:...|: |:....:..|.   .
Human   376 DVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDD-WKDFLYSYFKD---K 436

  Fly   477 KDYNIKTIMDSWTLQTGYPVINVTRDYTSRTAKLSQERYLLNTDVSRAHKGCWWVPLSYTNQEE- 540
            .|...:...::|....|.|.|....|.|           |.|..::.:.:   |:    |.:|: 
Human   437 VDVLNQVDWNAWLYSPGLPPIKPNYDMT-----------LTNACIALSQR---WI----TAKEDD 483

  Fly   541 -KDFNNTAPKEWMECTETGESVPKTIHDLPGP 571
             ..||.|..|: :...:..|.:.:|:...|.|
Human   484 LNSFNATDLKD-LSSHQLNEFLAQTLQRAPLP 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11951NP_001350853.2 M1_APN-Q_like 35..490 CDD:341064 106/467 (23%)
ERAP1_C 574..902 CDD:463368
LTA4HNP_000886.1 leuko_A4_hydro 6..608 CDD:274120 124/552 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.