DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11951 and ltah-1.1

DIOPT Version :9

Sequence 1:NP_001350853.2 Gene:CG11951 / 43463 FlyBaseID:FBgn0039656 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_001023056.1 Gene:ltah-1.1 / 178176 WormBaseID:WBGene00016589 Length:609 Species:Caenorhabditis elegans


Alignment Length:694 Identity:159/694 - (22%)
Similarity:257/694 - (37%) Gaps:198/694 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DF---HFNGTVKIQIEVLQNTHNITLHSKDLTIDDTEITLSQIGGEE-----TTENCITSTAVNP 105
            ||   |..|.|.|.::|.|:|..|.|.::||::....:.|:   ||.     |.|:       |.
 Worm    30 DFEKKHIAGDVSITLDVKQDTERIVLDTRDLSVQSVALNLN---GEPKKAGFTLED-------NQ 84

  Fly   106 THDFYILNTCKELLAGQFYELSLPF-----SAKLQ--------DQLAGYYRSSYVNTVANETRWI 157
            .....::.|.:.|.:|....|.:.:     :|.||        |::|.|..|             
 Worm    85 ALGQKLVITTESLKSGDRPVLEIKYESSNNAAALQFLTAEQTTDRVAPYLFS------------- 136

  Fly   158 SVTQFEPAAARLAFPCFDEPG----YKASFAITLGYHKKYTGLSNMPVNETRPHESIPDYVWTSF 218
               |.:...||...||.|.|.    |:|...:.:|    .|.|.:.....:.|.|.....:: ||
 Worm   137 ---QCQAINARSIVPCMDTPSVKSTYEAEVCVPIG----LTCLMSAIGQGSTPSECGKRTIF-SF 193

  Fly   219 EESLPMSTYLVAYSLNDFSHKPSTLPNGTLFRTWARPNAIDQCDYAAELGPKVLKYYEELFGIKF 283
            ::.:.:.:||:|..:.....|..:    .....||.|:..:...|......|:||..|::.| .:
 Worm   194 KQPVSIPSYLLAIVVGHLERKEIS----ERCAVWAEPSQAEASFYEFAETEKILKVAEDVAG-PY 253

  Fly   284 PLPKVDQIAVP-DFSAGAMENWGLVTFAESTLLYSPEYSSQEAKQETANIVAHELAHQWFGNLVT 347
            ...:.|.:.:| .|..|.||| ..:||...|||        ...:...|::|||::|.|.|||||
 Worm   254 VWGRYDLVVLPATFPFGGMEN-PCLTFITPTLL--------AGDRSLVNVIAHEISHSWTGNLVT 309

  Fly   348 MKWWTDLWLNEGFATYVASLCVEDIHPQW-----RTLQLES-MSNLLTIFRKDSLESSHPISRPI 406
            ...|...||||||..::.    ..||.:.     |..:.|| ....|.....|.....|..::.:
 Worm   310 NFSWEHFWLNEGFTVFLE----RKIHGKMYGELERQFESESGYEEALVRTVNDVFGPDHEYTKLV 370

  Fly   407 EM--TSQISESFDEISYQKGSSVIRMMHLFLGEEA-FRTGLKSYLEKYTYKNAE----QDNLWES 464
            :.  .:...::|..:.|:|||:::..:...||:.: |...|:.|::||.||...    ::.|::|
 Worm   371 QNLGNADPDDAFSSVPYEKGSALLFTIEQALGDNSRFEQFLRDYIQKYAYKTVSTEEWKEYLYDS 435

  Fly   465 LTQA------------AHKTGSLPKDYNIKTIMDS-------WTLQTGYPVINVTRDYTSRT--- 507
            .|..            .||.|..||.....|.|.:       ||          |....:.|   
 Worm   436 FTDKKVILDNIDWNLWLHKAGLPPKPKYDSTPMQACKDLAAKWT----------TEGSEAPTDGE 490

  Fly   508 --AKLSQERYLLNTDVSRAHKGCWWVPLSYTNQEEKDFNNTAPKEWMECTETGESVPKTIHDLPG 570
              ||:|..:.|...|..|.:|                            |..|:.:|        
 Worm   491 VFAKMSNSQKLAVLDAVRVNK----------------------------TMFGDRMP-------- 519

  Fly   571 PDQWVIFNNQLSAPYKVNYDAQN------WKLL-IETLNSEDYHSIHVVNRAQLIDDVLYFAWTG 628
                     .|:|.||:: .|:|      |.:| :||            ..:.::|..|.||   
 Worm   520 ---------ALTATYKLD-QAKNAELKFSWLMLGLET------------KWSPIVDASLAFA--- 559

  Fly   629 EQDYEIALQVISYLER-ERELLPWKSAFDNL--QFVSGILRQTP 669
                 :|:..:.|.:. .|.|..|.:..|..  ||.:.|....|
 Worm   560 -----LAVGRMKYCKPIYRSLFGWSATRDRAISQFKANIPNMHP 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11951NP_001350853.2 M1_APN-Q_like 35..490 CDD:341064 122/498 (24%)
ERAP1_C 574..902 CDD:338125 24/106 (23%)
ltah-1.1NP_001023056.1 M1_LTA4H 8..453 CDD:189006 114/471 (24%)
Leuk-A4-hydro_C 468..608 CDD:312599 39/207 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.