DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11951 and Lta4h

DIOPT Version :9

Sequence 1:NP_001350853.2 Gene:CG11951 / 43463 FlyBaseID:FBgn0039656 Length:924 Species:Drosophila melanogaster
Sequence 2:NP_032543.2 Gene:Lta4h / 16993 MGIID:96836 Length:611 Species:Mus musculus


Alignment Length:542 Identity:121/542 - (22%)
Similarity:211/542 - (38%) Gaps:117/542 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GTVKIQIEVL-QNTHNITLHSKDLTIDDTEITLSQIGGEETTENCITSTAVNPTHDFYILNTCKE 117
            ||..:.::.. :|..::||.:|||||:..     .|.|:|..               |.|.. .:
Mouse    37 GTAALTVQSQEENLRSLTLDTKDLTIEKV-----VINGQEVK---------------YTLGE-SQ 80

  Fly   118 LLAGQFYELSLPFSAKLQDQLAGYYRSSYVNTVANET-------RWIS------------VTQFE 163
            ...|...|:|||.:.....::        |..::.||       :|::            .:|.:
Mouse    81 GYKGSPMEISLPIALSKNQEI--------VIEISFETSPKSSALQWLTPEQTSGKQHPYLFSQCQ 137

  Fly   164 PAAARLAFPCFDEPGYKASFAITLGYHKKYTGLSNMPVNETRPHESIPDYVWTSFEESLPMSTYL 228
            ....|...||.|.|..|.::...:...|:...|.:...:...|....|......|.:.:|:..||
Mouse   138 AIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGEAPDPEDPSRKIYRFNQRVPIPCYL 202

  Fly   229 VAYSLNDFSHK---PSTLPNGTLFRTWARPNAIDQCDYAAELGPKVLKYYEELFGIKFPLPKVDQ 290
            :|..:.....:   |.||       .|:....:::..........:||..|:|.| .:...:.|.
Mouse   203 IALVVGALESRQIGPRTL-------VWSEKEQVEKSANEFSETESMLKIAEDLGG-PYVWGQYDL 259

  Fly   291 IAV-PDFSAGAMENWGLVTFAESTLLYSPEYSSQEAKQETANIVAHELAHQWFGNLVTMKWWTDL 354
            :.: |.|..|.||| ..:||...|||        ...:..:|::|||::|.|.|||||.|.|...
Mouse   260 LVLPPSFPYGGMEN-PCLTFVTPTLL--------AGDKSLSNVIAHEISHSWTGNLVTNKTWDHF 315

  Fly   355 WLNEGFATYV-ASLC-------VEDIHP--QWRTLQLESMSNLLTIFRKDSLESSHPISRPIEMT 409
            |||||...|: ..:|       ....|.  .|..||     |.:..|.:     |||.::.:...
Mouse   316 WLNEGHTVYLERHICGRLFGEKFRHFHALGGWGELQ-----NTIKTFGE-----SHPFTKLVVDL 370

  Fly   410 SQISE--SFDEISYQKGSSVIRMMHLFL-GEEAFRTGLKSYLEKYTYKNAEQDNLWESLTQAAHK 471
            ..:..  ::..|.|:||.:::..:...| |.|.|...||:|::|::|::...|: |:|...:..|
Mouse   371 KDVDPDVAYSSIPYEKGFALLFYLEQLLGGPEVFLGFLKAYVKKFSYQSVTTDD-WKSFLYSHFK 434

  Fly   472 TGSLPKDYNIKTIMDSWTLQTGYPVINVTRDYTSRTAKLSQERYLLNTDVSRAHKGCWWVPL--- 533
            .   ..|...:...::|....|.|.:....|.|           |.|..::.:.:   ||..   
Mouse   435 D---KVDLLNQVDWNTWLYAPGLPPVKPNYDVT-----------LTNACIALSQR---WVTAKEE 482

  Fly   534 ---SYTNQEEKDFNNTAPKEWM 552
               |::..:.||.::....|::
Mouse   483 DLSSFSIADLKDLSSHQLNEFL 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11951NP_001350853.2 M1_APN-Q_like 35..490 CDD:341064 109/472 (23%)
ERAP1_C 574..902 CDD:338125
Lta4hNP_032543.2 leuko_A4_hydro 6..608 CDD:274120 121/542 (22%)
M1_LTA4H 6..450 CDD:189006 109/472 (23%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 135..137 1/1 (100%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 267..272 1/4 (25%)
Leuk-A4-hydro_C 468..607 CDD:286244 6/40 (15%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:P09960 564..566
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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