DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp1 and USP38

DIOPT Version :9

Sequence 1:NP_001263061.1 Gene:Usp1 / 43462 FlyBaseID:FBgn0028476 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_115946.2 Gene:USP38 / 84640 HGNCID:20067 Length:1042 Species:Homo sapiens


Alignment Length:797 Identity:160/797 - (20%)
Similarity:238/797 - (29%) Gaps:337/797 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 LCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHAR 381
            |.|:||:||:|||:..|..|..|                   |:|.   .||..|          
Human   447 LINLGNTCYMNSVIQALFMATDF-------------------RRQV---LSLNLN---------- 479

  Fly   382 SWSSKDLATSTDQYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADT 446
                               |.|              |:.:||..|:..|...:    .|.|....
Human   480 -------------------GCN--------------SLMKKLQHLFAFLAHTQ----REAYAPRI 507

  Fly   447 LLHAIQDVNATFEGNQQQDAHEFLMCVLNCIRETNQSL-IKA------IGECPEVIANGYIANPD 504
            ...|.:.  ..|....|||..|:|..:|:.:.|..:.| ::|      |.||.|           
Human   508 FFEASRP--PWFTPRSQQDCSEYLRFLLDRLHEEEKILKVQASHKPSEILECSE----------- 559

  Fly   505 EVDTGEGQDRTDSTASQNLNAGNGSLATSQTTTTKTS---------FFSRKSKRKDEVKPSKSTR 560
                         |:.|.:    .|.|...|.|.:||         .|..|.:........:|| 
Human   560 -------------TSLQEV----ASKAAVLTETPRTSDGEKTLIEKMFGGKLRTHIRCLNCRST- 606

  Fly   561 VQSPLKENSPTAGGITGAGTAHATANSLFYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQ 625
                    |......|....|...::||..::..|      .:.|.|....|::  .|::|.|  
Human   607 --------SQKVEAFTDLSLAFCPSSSLENMSVQD------PASSPSIQDGGLM--QASVPGP-- 653

  Fly   626 ATKYSSDDEM----NSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLSCETITRQKQGM 686
                 |::.:    .:|..:.|.:..|:.|......|:.|:...:...:.|.|.           
Human   654 -----SEEPVVYNPTTAAFICDSLVNEKTIGSPPNEFYCSENTSVPNESNKILV----------- 702

  Fly   687 LDISVPVPISGYDNADLQDKPS-------TYIQNSCITKEYFRGENKYSCNQCTGYTEAIRSISY 744
                         |.|:..||.       |.:.|..:..|...|:|:|.|..|.....|.:::..
Human   703 -------------NKDVPQKPGGETTPSVTDLLNYFLAPEILTGDNQYYCENCASLQNAEKTMQI 754

  Fly   745 EVLPRLLVIQLNRFSGG---------MEKVSTYVPTTFTLPCFCATC--------------CELG 786
            ...|..|::.|.|||..         ::.||  :|....||....|.              .:|.
Human   755 TEEPEYLILTLLRFSYDQKYHVRRKILDNVS--LPLVLELPVKRITSFSSLSESWSVDVDFTDLS 817

  Fly   787 EG---------------NKLHVYKLYSVITHVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTM 836
            |.               .||..|.|.||:.|.|.:...|||.:|.               |..|.
Human   818 ENLAKKLKPSGTDEASCTKLVPYLLSSVVVHSGISSESGHYYSYA---------------RNITS 867

  Fly   837 TNSQTMASQAVPSNENAAPNNGSSSVASTPVIAAASALASSGNILMKKMKFGRSKASS------- 894
            |:|   :.|....:|                   |.|||||.:.|:     ||...|:       
Human   868 TDS---SYQMYHQSE-------------------ALALASSQSHLL-----GRDSPSAVFEQDLE 905

  Fly   895 SGDMSK----------------NVKQV--------------------NGIISKNITNGI------ 917
            :.:|||                :|:::                    ||:...|.|:|:      
Human   906 NKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQHSTNGLSGNNPTSGLWINGDP 970

  Fly   918 -------------GKLSISTTCQGVNCCAMRLCCTQQTSSSNSTSCSDFSEESLQNGSNSNLSFG 969
                         .||.:..  |.:|..|..|       .:.|.|||     ...||.:.|   .
Human   971 PLQKELMDAITKDNKLYLQE--QELNARARAL-------QAASASCS-----FRPNGFDDN---D 1018

  Fly   970 GSGSTYPTGYGSTGRGG 986
            ..||..|||.|  |.||
Human  1019 PPGSCGPTGGG--GGGG 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp1NP_001263061.1 Peptidase_C19 308..819 CDD:271592 113/566 (20%)
USP38NP_115946.2 Peptidase_C19H 446..947 CDD:239129 133/690 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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