DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp1 and USP1

DIOPT Version :9

Sequence 1:NP_001263061.1 Gene:Usp1 / 43462 FlyBaseID:FBgn0028476 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_001017415.1 Gene:USP1 / 7398 HGNCID:12607 Length:785 Species:Homo sapiens


Alignment Length:902 Identity:217/902 - (24%)
Similarity:340/902 - (37%) Gaps:223/902 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 ARSSRKRTNTMSLYDRRFQTTTEERRVANGYGGNAARSVTGSSSNEIESQEPQSHQYYGPNGGSN 293
            :|.|..:.|.:||   :|....|.:|         |...|.|..||.::.|     |........
Human    13 SRGSPSKKNRLSL---KFFQKKETKR---------ALDFTDSQENEEKASE-----YRASEIDQV 60

  Fly   294 AAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNSVVYTLRFAPHFLHNLHHLIQDLNVVQQTIV 358
            ...|.:.........|..|.:| |.|:||:|||||::..|.|.|.|...:.||...::..::.:.
Human    61 VPAAQSSPINCEKRENLLPFVG-LNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKKEALK 124

  Fly   359 RQQTARSASLGKNVSAAQLEHARSWSSKDLATSTDQYSGQNGGVNSGNGGSGSSKSTHQSVTEKL 423
            .:...:.....|..|.|..|...|..|  |..|.:|.             ..|.....:..|::|
Human   125 DEANQKDKGNCKEDSLASYELICSLQS--LIISVEQL-------------QASFLLNPEKYTDEL 174

  Fly   424 HELYNNLHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVLNCIRETNQSL---- 484
                          :|:|..   ||:.::::|..:||..|.||.|.|.|:|..|:||.|.|    
Human   175 --------------ATQPRR---LLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEE 222

  Fly   485 IKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTA-----SQNLNAGNGSLATSQTTTTKTSFFS 544
            :|.:.|.|..:..  |.:|.|...|......||..     .:.|..|||.      ..:.|.|.:
Human   223 VKNVAELPTKVEE--IPHPKEEMNGINSIEMDSMRHSEDFKEKLPKGNGK------RKSDTEFGN 279

  Fly   545 RKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATANSL--------FYL---------- 591
            .|.|    ||.||.   ...|:||....     .....||:::|        .|:          
Human   280 MKKK----VKLSKE---HQSLEENQRQT-----RSKRKATSDTLESPPKIIPKYISENESPRPSQ 332

  Fly   592 --NTVDLSGASSTSGSAS-----------TSASGVVSTSAALPTPPQAT--KYSSDDEMNSA--- 638
              :.|.::...|.:...|           |:..||...|......|:..  |..||:..|..   
Human   333 KKSRVKINWLKSATKQPSILSKFCSLGKITTNQGVKGQSKENECDPEEDLGKCESDNTTNGCGLE 397

  Fly   639 ----TV-------LKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVP 692
                ||       :|...:.||:|   ........|:|.:||.|:||.||::|.:::...|||||
Human   398 SPGNTVTPVNVNEVKPINKGEEQI---GFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVP 459

  Fly   693 VPISGY----DNADLQDKPSTYIQ------NSCITKEYFRGENKYSCNQCTGYTEAIRSISYEVL 747
            |.....    :::::..:|.|.::      :...:.|...||:||.|..|..||||.||:.::.:
Human   460 VQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKM 524

  Fly   748 PRLLVIQLNRFS----------GGMEKVSTYVPTTFTLPCFCATCCELGEGNKLHV---YKLYSV 799
            |.::.|.|..|:          ||:.|::|.:.|...|        .|.|.:....   |.|::|
Human   525 PEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKL--------SLEEWSTKPTNDSYGLFAV 581

  Fly   800 ITHVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTMTNSQTMASQAVPSNENAA----PNNGSS 860
            :.|.|.|::.|||.|.....||.|    ...|:.|.:.:......:..|.||..|    .|....
Human   582 VMHSGITISSGHYTASVKVTDLNS----LELDKGNFVVDQMCEIGKPEPLNEEEARGVVENYNDE 642

  Fly   861 SVASTPVIAAASALASSGNILMKKMKFGRSKASSSGDMSKNVKQV---NGIISK------NITNG 916
            .|:                     ::.|.:...|.....|||:.:   .|..||      |..:.
Human   643 EVS---------------------IRVGGNTQPSKVLNKKNVEAIGLLGGQKSKADYELYNKASN 686

  Fly   917 IGKLSISTTCQGVNCCAMRLCCTQQTSSSNSTSCSDFSEESL-QNGSNSNLSFGGSGSTYPTGYG 980
            ..|::.:...:..|         .:||.:..|..||.::||. |.|.|.      ||......| 
Human   687 PDKVASTAFAENRN---------SETSDTTGTHESDRNKESSDQTGINI------SGFENKISY- 735

  Fly   981 STGRGGVRANYAHGGPDPIWYMCDDDKIKAMTQREFEELLSPTRKITITPYLLFYAR 1037
                 .|::...:.|.   |.:.||.::|...:::|...|||:...|.|||||||.:
Human   736 -----VVQSLKEYEGK---WLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLFYKK 784

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp1NP_001263061.1 Peptidase_C19 308..819 CDD:271592 148/589 (25%)
USP1NP_001017415.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..52 7/32 (22%)
Peptidase_C19 82..>222 CDD:321984 47/172 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..336 19/95 (20%)
Peptidase_C19O <424..599 CDD:239136 53/182 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 693..723 9/38 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I4597
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D210538at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto90955
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X5721
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.960

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