DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp1 and USP46

DIOPT Version :9

Sequence 1:NP_001263061.1 Gene:Usp1 / 43462 FlyBaseID:FBgn0028476 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_073743.2 Gene:USP46 / 64854 HGNCID:20075 Length:366 Species:Homo sapiens


Alignment Length:564 Identity:96/564 - (17%)
Similarity:151/564 - (26%) Gaps:280/564 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 GSSSNEIE-----SQEPQSHQYYGPNGGSNAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNS 328
            |::::.:|     .|.|.:..|:|                             |.|.||:||.||
Human    13 GTNASALEKDIGPEQFPINEHYFG-----------------------------LVNFGNTCYCNS 48

  Fly   329 VVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTD 393
            |:..|.|...|..|:                                            ||....
Human    49 VLQALYFCRPFRENV--------------------------------------------LAYKAQ 69

  Fly   394 QYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATF 458
            |...:|                   :...|.:|::::...:......|  ....:..::..|..|
Human    70 QKKKEN-------------------LLTCLADLFHSIATQKKKVGVIP--PKKFISRLRKENDLF 113

  Fly   459 EGNQQQDAHEFLMCVLNCIRETNQSLIKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTASQNL 523
            :...||||||||..:||.|.:..|...|                         |::.        
Human   114 DNYMQQDAHEFLNYLLNTIADILQEEKK-------------------------QEKQ-------- 145

  Fly   524 NAGNGSLATSQTTTTKTSFFSRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATANSL 588
               ||.|                          |:..:..|.:.|.|                  
Human   146 ---NGKL--------------------------KNGNMNEPAENNKP------------------ 163

  Fly   589 FYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERIRE 653
                                                                             
Human   164 ----------------------------------------------------------------- 163

  Fly   654 LNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCIT- 717
             .|.:....|:|.:...|:||:|||::.:.:..||:||.|.                 ||:.|| 
Human   164 -ELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVE-----------------QNTSITH 210

  Fly   718 -------KEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNRFSGGMEKVSTYVPTTF-- 773
                   .|....|.||.|..|....||.:.:..:.||.:|.:.|.||. .||::..|...::  
Human   211 CLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFK-YMEQLHRYTKLSYRV 274

  Fly   774 ----TLPCFCATCCELGEGNKLHVYKLYSVITHVGATLTVGHYI 813
                .|..|..:...:   |...:|.|.:|:.|.|:....||||
Human   275 VFPLELRLFNTSSDAV---NLDRMYDLVAVVVHCGSGPNRGHYI 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp1NP_001263061.1 Peptidase_C19 308..819 CDD:271592 90/520 (17%)
USP46NP_073743.2 Peptidase_C19G 36..363 CDD:239128 91/541 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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