DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp1 and USP35

DIOPT Version :10

Sequence 1:NP_651687.3 Gene:Usp1 / 43462 FlyBaseID:FBgn0028476 Length:1078 Species:Drosophila melanogaster
Sequence 2:NP_065849.1 Gene:USP35 / 57558 HGNCID:20061 Length:1018 Species:Homo sapiens


Alignment Length:710 Identity:134/710 - (18%)
Similarity:233/710 - (32%) Gaps:207/710 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 LNHAPSM-GTL----CNIGNSC--YLNSVVYTLRFA----PHFLHNLHHLIQDLNVVQQTIVRQQ 361
            |.|.|.| .:|    .|.|.||  .|..:|:.:.|.    |.....:...|:||:|..:..::| 
Human   348 LPHIPPMVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQ- 411

  Fly   362 TARSASLGKNVSAAQLEHARSWSSKDLATSTDQYSGQNGGVNSGNGGSGSS-------------- 412
                 .||::...:|......:..:.:|.|.   :|:.|.:|.||....:|              
Human   412 -----LLGQDAWTSQKSELAGFYPRLMAKSD---TGKIGLINLGNTCYVNSILQALFMASDFRHC 468

  Fly   413 -----KSTHQSVTEKLHELYNNL-HGNEMADSTEPYHADTLLHAIQDVNAT----FEGNQQQDAH 467
                 ::..|.:..||..|:..| |....|.|.|.:           ::|:    |....|||..
Human   469 VLRLTENNSQPLMTKLQWLFGFLEHSQRPAISPENF-----------LSASWTPWFSPGTQQDCS 522

  Fly   468 EFLMCVLNCIRETNQSLIKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTASQNLNAG------ 526
            |:|..:|:.:.|..::..:.   |.::..:...:.|:|      .....||:.:.:..|      
Human   523 EYLKYLLDRLHEEEKTGTRI---CQKLKQSSSPSPPEE------PPAPSSTSVEKMFGGKIVTRI 578

  Fly   527 ------NGSLATSQTTTTKTSF----FSRKSKRKDEVKPSKS---------TRVQSP-------- 564
                  |.|......|....:|    ..|:.:....::|::.         |..|.|        
Human   579 CCLCCLNVSSREEAFTDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQ 643

  Fly   565 -----LKENSPTAGGITGAGTAHATANSLFYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPP 624
                 .::..||:..|.|             |::.:..|.||..........|          ..
Human   644 RKHCITEDTPPTSLYIEG-------------LDSKEAGGQSSQEERIEREEEG----------KE 685

  Fly   625 QATKYSSDDEMNSATVLKDKMRLEERIRELNLNFFSSDFEGIVVLTTKCLSCETITRQKQGML-- 687
            :.|:.....|...:|..:.:...||.:.|        :.|.:...|.|    |....:::..|  
Human   686 ERTEKEEVGEEEESTRGEGEREKEEEVEE--------EEEKVEKETEK----EAEQEKEEDSLGA 738

  Fly   688 ----DISVPVPISGYDNADLQDKPSTY-IQNSCITKEYFRGENKYSCNQCTGYTEAIRSISYEVL 747
                |.::|   ||......:...|.. :.|..::.|....||:|.|..|....:|.:.:.....
Human   739 GTHPDAAIP---SGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESCASLQDAEKVVELSQG 800

  Fly   748 PRLLVIQLNRFSGGMEKV-------STYVPTTFTLPCFCATCCELGEGNKLHVYKLYSVITHVGA 805
            |..|::.|.|||..:..:       ...:|....||.         .|.:...|.|.||:.|.|.
Human   801 PCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPL---------AGGRGQAYDLCSVVVHSGV 856

  Fly   806 TLTVGHY----------------------------------IAYTCFLDLASDYVNCPKDRRNTM 836
            :...|||                                  ::::.|..:::.....|||....:
Human   857 SSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVL 921

  Fly   837 TNSQTMASQAVPSNENAAPNNGSSSVASTPVIAAASALA-SSGNI--LMKKMKFGRSKAS 893
            ...|.       ..|......|||.|.:.|.:......| |..||  |.::.|..||:|:
Human   922 FYRQR-------PREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYLQEQEKEARSRAA 974

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp1NP_651687.3 Peptidase_C19 308..819 CDD:470612 114/631 (18%)
USP35NP_065849.1 COG1365 <55..97 CDD:440976
Peptidase_C19 442..924 CDD:470612 94/548 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 544..566 4/27 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 610..757 28/184 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 984..1011
Blue background indicates that the domain is not in the aligned region.

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