Protein Alignment Usp1 and usp12b

DIOPT Version :10

• Sequence 1: NP_651687.3
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: XP_688359.3
• Gene: usp12b / 559878
• ZFINID: ZDB-GENE-100209-4
• Length: 383
• Species: Danio rerio
• Alignment Length: 561
• Identity: 100/561 - (17%)
• Similarity: 161/561 - (28%)
• Gaps: 261/561 - (46%)

  Fly   269 GSSSNEIE-----SQEPQSHQYYGPNGGSNAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNS 328
            |::::.:|     .|.|.:..|:|                             |.|.||:||.||
Zfish    17 GANASALEKEIGPEQFPVNEHYFG-----------------------------LVNFGNTCYCNS 52

  Fly   329 VVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTD 393
            |:..|.|...|                             .:.|.|.:::..|.
Zfish    53 VLQALYFCRPF-----------------------------REKVLAYKIQPRRK----------- 77

  Fly   394 QYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATF 458
                                   :|:...|.:|:|::...:......|  ....:..::..|..|
Zfish    78 -----------------------ESLLTCLADLFNSIATQKKKVGVIP--PKKFISRLRKENELF 117

  Fly   459 EGNQQQDAHEFLMCVLNCIRETNQSLIKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTASQNL 523
            :...||||||||..:||.|.:..|.     .:..|...||.:..
Zfish   118 DNYMQQDAHEFLNYLLNTIADLLQE-----EKSQERQQNGKVVQ--------------------- 156

  Fly   524 NAGNGSLATSQTTTTKTSFFSRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATANSL 588
            |.|:||                                           ||
Zfish   157 NGGSGS-------------------------------------------GG-------------- 164

  Fly   589 FYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERIRE 653
                    .|:.|::|...|                                       ||:.::
Zfish   165 --------GGSGSSTGEGET---------------------------------------EEKTQQ 182

  Fly   654 LNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCIT- 717
               .:....|:|.:...|:||:||.::.:.:..||:||.|.                 ||:.||
Zfish   183 ---TWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVE-----------------QNTSITH 227

  Fly   718 -------KEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNRFSGGMEKVSTYVPTTF-- 773
                   .|....|.||.|.||....||.:.:..:.||.:|.:.|.||. .|:::..|...::
Zfish   228 CLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFK-YMDQLHRYTKLSYRV 291

  Fly   774 TLPCFCATCCELGEG-NKLHVYKLYSVITHVGATLTVGHYI 813
            ..|.........|:. |...:|.|.:|:.|.|:....||||
Zfish   292 VFPLELRLFNTSGDATNPDRLYDLVAVVVHCGSGPNRGHYI 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_651687.3	Peptidase_C19	308..819	CDD:470612	94/517 (18%)
usp12b	XP_688359.3	Peptidase_C19G	40..380	CDD:239128	95/538 (18%)