Protein Alignment Usp1 and faf

DIOPT Version :9

• Sequence 1: NP_001263061.1
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_524612.2
• Gene: faf / 43749
• FlyBaseID: FBgn0005632
• Length: 2778
• Species: Drosophila melanogaster
• Alignment Length: 604
• Identity: 105/604 - (17%)
• Similarity: 169/604 - (27%)
• Gaps: 247/604 - (40%)

  Fly   564 PLKE--------NSPTAG--GITGAGTAHATANSLFYLNTV------------------------ 594
            ||:|        ..||.|  |:..||   ||.    |:|:|
  Fly  1649 PLREWDYLPPVGARPTKGFCGLKNAG---ATC----YMNSVLQQLYMVPAVRVGILRAHGAATTD 1706

  Fly   595 --DLSGASSTSGSASTSA--SGVVSTSAALPTPPQATKYSSDDEMNS--ATVLKD---------- 643
              |.||.|..:|....||  ||..|...:||:.....:....|...:  ..:||.
  Fly  1707 GEDFSGDSDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGH 1771

  Fly   644 ----------------------KMRLEERIRELNLNFFSSDFEGIVVLTTK-------------- 672
                                  .:|.::...|..::...|..||:..|...
  Fly  1772 SALQYYVPRGLWTHFKLLGEPVNLREQQDAVEFFMSLLESLDEGLKALGQPQLMNATLGGSFSDQ 1836

  Fly   673 --CLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCITKEYFRGENKYSCNQCTGY 735
              |..|.....:::.....||.:    .:::.|.:....|::.     |...|.:.|.|::|...
  Fly  1837 KICQECPHRYSKEEPFSVFSVDI----RNHSSLTESLEQYVKG-----ELLEGADAYHCDKCDKK 1892

  Fly   736 TEAIRSISYEVLPRLLVIQLNRFSGGMEKVSTYVPTTFTLPCFCATCCELGEGNKLHVYKLYSVI 800
            ...::.:..:.||.:|.|||.||....|:|             ||
  Fly  1893 VVTVKRVCVKKLPPVLAIQLKRFEYDYERV-------------CA-------------------- 1924

  Fly   801 THVGATLTVGHYIAYTCFLDLASDYVNCPKDRRNTMTNSQTMASQAVPSNENAAPNNGSSSVAST 865
                  :....|..:...||: ..|         |::....:..:.|...:|...|..::....|
  Fly  1925 ------IKFNDYFEFPRILDM-EPY---------TVSGLAKLEGEVVEVGDNCQTNVETTKYELT 1973

  Fly   866 PVIAAASALASSGNILMKKMKFGRSKASSSGDMSKNVKQVNGIISKNITNGIGKLSISTTCQGVN 930
            .:: ..|..||.|:..                        :.|:|||..||
  Fly  1974 GIV-VHSGQASGGHYF------------------------SYILSKNPANG-------------- 1999

  Fly   931 CCAMRLCCTQQTSSSNSTSCSDFSEESLQNGSNSNLSFGGS--GSTYPTGYGSTGRGGVRANYAH 993
                 .|...:......|.|....:|.::..     .|||.  |.||
  Fly  2000 -----KCQWYKFDDGEVTECKMHEDEEMKAE-----CFGGEYMGETY------------------ 2036

  Fly   994 GGPDPIWYMCDDDKIKAMTQREFEELLSPTRKITITPYLLFYARFDLQPQKATPPMPGSSTTP-- 1056
                       |:.:|.|..|.        :|.....|:|||.|.|..|.:..|.:...|...
  Fly  2037 -----------DNNLKRMQYRR--------QKRWWNAYMLFYTRCDQTPVQYEPSVEQLSLAESR 2082

  Fly  1057 ----PPPSSAQSSWSNENV 1071
                |.|...:.|..::|:
  Fly  2083 NMVLPLPKPIERSVRHQNI 2101

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	59/342 (17%)
faf	NP_524612.2	peptidase_C19C	1666..2064	CDD:239124	92/548 (17%)
		UCH	1668..2059	CDD:278850	88/541 (16%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456839
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24006
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.030