Protein Alignment Usp1 and Usp12-46

DIOPT Version :9

• Sequence 1: NP_001263061.1
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Sequence 2: NP_651099.1
• Gene: Usp12-46 / 42702
• FlyBaseID: FBgn0039025
• Length: 424
• Species: Drosophila melanogaster
• Alignment Length: 567
• Identity: 116/567 - (20%)
• Similarity: 187/567 - (32%)
• Gaps: 217/567 - (38%)

  Fly   269 GSSSNEIESQ-----EPQSHQYYGPNGGSNAAGAGAGLNGSAAALNHAPSMGTLCNIGNSCYLNS 328
            |::.:::|.:     .|.:..|:|                             |.|.||:||.||
  Fly     2 GANVSQLEREIGSDLFPPNEHYFG-----------------------------LVNFGNTCYSNS 37

  Fly   329 VVYTLRFAPHFLHNLHHLIQDLNVVQQTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTD 393
            |:..|.|...|                   |::..
  Fly    38 VLQALYFCKPF-------------------REKVL------------------------------ 53

  Fly   394 QYSGQNGGVNSGNGGSGSSKSTHQSVTEKLHEL-YNNLHGNEMADSTEPYHADTLLHAIQDVNAT 457
            :|..:|             |...:::...|.:| |:.....:...|..|....|.|...::   .
  Fly    54 EYKAKN-------------KRPKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKE---E 102

  Fly   458 FEGNQQQDAHEFLMCVLNCIRETNQSLIKAIGECPEVIANGYIANPDEVDTGEGQDRTDSTASQN 522
            |:...||||||||..::|.|.              |:|                      .|.:|
  Fly   103 FDNYMQQDAHEFLNFLINHIN--------------EII----------------------LAERN 131

  Fly   523 LNAGNGS-LATSQTTTTKTSFFSRKSKRKDEVKPSKSTRVQSPLKENSPTAGGITGAGTAHATAN 586
            ....||: .||:|..:|.....|..||       |.||...:....::..:.|.:...|....||
  Fly   132 AGPSNGNPKATNQGGSTSAMASSIASK-------SSSTSNSNSNSNSTTNSNGNSSNSTGSLNAN 189

  Fly   587 SLFYLNTVDLSGASSTSGSASTSASGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERI 651
            :    :.:|.||:.:.:.:...|.:| ..|:.|...|..                         :
  Fly   190 T----SVLDASGSLTATTTPIISGNG-TGTNGANSEPTW-------------------------V 224

  Fly   652 RELNLNFFSSDFEGIVVLTTKCLSCETITRQKQGMLDISVPVPISGYDNADLQDKPSTYIQNSCI 716
            .|:        |:||:...|:||:|||::.:.:...|:.|.|.                 ||:.|
  Fly   225 HEI--------FQGILTSETRCLNCETVSSKDENFFDLQVDVD-----------------QNTSI 264

  Fly   717 T--------KEYFRGENKYSCNQCTGYTEAIRSISYEVLPRLLVIQLNRFSGGME------KVST 767
            |        .|....:||:.|:.|..|.||.:.:..:.||.:|.:.|.||. .||      |||.
  Fly   265 THCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFK-YMEQFNRHIKVSH 328

  Fly   768 YVPTTFTLPCFCATCCELGEGNKLHVYKLYSVITHVGATLTVGHYIA 814
            .|.....|..|..:...:   |...:|.|.:|:.|.|:....||||:
  Fly   329 RVVFPLELRLFNTSDDAV---NPDRLYDLTAVVIHCGSGPNRGHYIS 372

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	111/523 (21%)
Usp12-46	NP_651099.1	Peptidase_C19G	25..419	CDD:239128	112/544 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1864
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24006
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.000